Evidence map›Paper›PMID 32945589›Full record

ArticleAngewandte Chemie (International ed. in English)2020

Transcription Factor Based Small-Molecule Sensing with a Rapid Cell Phone Enabled Fluorescent Bead Assay.

Margaret Chern, Padric M Garden, R C Baer, James E Galagan, Allison M Dennis

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. The quantum dotChemical science · 2022
    Article
  3. Engineering Brightness Matched Indium Phosphide Quantum Dots.Chemistry of materials : a publication of the American Chemical Society · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Margaret ChernDivision of Materials Science and Engineering, Boston University, Boston, MA, USA.ORCID 0000-0003-3993-5500
Padric M GardenDepartment of Biomedical Engineering, Boston University, Boston, MA, USA.ORCID 0000-0002-2161-2730
R C BaerDepartment of Microbiology, Boston University, Boston, MA, USA.ORCID 0000-0001-8512-6160
James E GalaganDepartment of Biomedical Engineering, Boston University, Boston, MA, USA.ORCID 0000-0003-0542-3291
Allison M DennisDivision of Materials Science and Engineering, Boston University, Boston, MA, USA.ORCID 0000-0001-5759-9905

Funding

Multiplexed Imaging in the Near Infrared with Indium Phosphide Quantum ShellsR01GM129437 · NIGMS · NORTHEASTERN UNIVERSITY · PI DENNIS, ALLISON MARIE · 2019 to 2022
$2.1M
NIGMS NIH HHS R01 GM129437NIGMS NIH HHS R01GM129437
6 · The paper itself

Abstract

Recently, allosteric transcription factors (TFs) were identified as a novel class of biorecognition elements for in vitro sensing, whereby an indicator of the differential binding affinity between a TF and its cognate DNA exhibits dose-dependent responsivity to an analyte. Described is a modular bead-based biosensor design that can be applied to such TF-DNA-analyte systems. DNA-functionalized beads enable efficient mixing and spatial separation, while TF-labeled semiconductor quantum dots serve as bright fluorescent indicators of the TF-DNA bound (on bead) and unbound states. The prototype sensor for derivatives of the antibiotic tetracycline exhibits nanomolar sensitivity with visual detection of bead fluorescence. Facile changes to the sensor enable sensor response tuning without necessitating changes to the biomolecular affinities. Assay components self-assemble, and readout by eye or digital camera is possible within 5 minutes of analyte addition, making sensor use facile, rapid, and instrument-free.

Indexed as

Biosensing TechniquesCell PhoneAnti-Bacterial AgentsDNAFluorescent DyesQuantum DotsSemiconductorsTetracyclineTranscription FactorsAnti-Bacterial AgentsDNAFluorescent DyesTetracyclineTranscription FactorsbiosensorsDNAfluorescencequantum dotstranscription factors

Identifiers

PMID32945589
PMCPMC8243852

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.