Evidence map›Paper›PMID 32945428›Full record

ArticleMolecular medicine reports2020

Upregulated lncRNA Pvt1 may be important for cardiac remodeling at the infarct border zone.

Baihui Liu, Yuanjuan Cheng, Jiakun Tian, Li Zhang, Xiaoqian Cui

Open access · bronzeAbstract read
In one paragraph

Article in Molecular medicine reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Baihui Liu *Department of Emergency Medicine, The Second Hospital of Jilin University, Changchun, Jilin 130041, P.R. China.
Yuanjuan Cheng *Department of Nursing, The Second Hospital of Jilin University, Changchun, Jilin 130041, P.R. China.
Jiakun TianDepartment of Emergency Medicine, The Second Hospital of Jilin University, Changchun, Jilin 130041, P.R. China.
Li ZhangDepartment of Emergency Medicine, The Second Hospital of Jilin University, Changchun, Jilin 130041, P.R. China.
Xiaoqian CuiDepartment of Emergency Medicine, The Second Hospital of Jilin University, Changchun, Jilin 130041, P.R. China.
Second Affiliated Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myocardial infarction (MI) is a leading cause of mortality due to progression to ventricular arrhythmias (VAs) or heart failure (HF). Cardiac remodeling at the infarct border zone (IBZ) is the primary contributor for VAs or HF. Therefore, genes involved in IBZ remodeling may be potential targets for the treatment of MI, but the mechanism remains unclear. The present study aimed to explain the molecular mechanisms of IBZ remodeling based on the roles of long non‑coding RNAs (lncRNAs). After downloading miRNA (GSE76592) and mRNA/lncRNA (GSE52313) datasets from the Gene Expression Omnibus database, 23 differentially expressed miRNAs (DEMs), 2,563 genes (DEGs) and 168 lncRNAs (DELs) were identified between IBZ samples of MI mice and sham controls. A total of 483 DEGs were predicted to be regulated by 23 DEMs, among which Itgam, Met and TNF belonged to hub genes after five topological parameters were calculated for genes in the protein‑protein interaction network. These hub genes‑associated DEMs (mmu‑miR‑181a, mmu‑miR‑762) can also interact with six DELs (Gm15832, Gas5, Gm6634, Pvt1, Gm14636 and A330023F24Rik) to constitute the competing endogenous RNA (ceRNA) axes. Furthermore, a co‑expression network was constructed based on the co‑expression pairs between 44 DELs and 297 DEGs, in which Pvt1 and Bst1 were overlapped with the ceRNA network. Thus, Bst1‑associated ceRNA (Pvt1‑mmu‑miR‑181a‑Bst1) and co‑expression (Pvt‑Bst1) axes were also pivotal for MI. Accordingly, Pvt1 may be a crucial lncRNA for modification of cardiac remodeling in the IBZ after MI and may function by acting as a ceRNA for miR‑181a to regulate TNF/Met/Itgam/Bst1 or by co‑expressing with Bst1.

Indexed as

Up-RegulationAnimalsComputational BiologyDatabases, GeneticDisease Models, AnimalGene Regulatory NetworksHumansMiceMicroRNAsMyocardial InfarctionRNA, Long NoncodingVentricular RemodelingMicroRNAsPVT1 long-non-coding RNA, mouseRNA, Long Noncodingco-expressioncompeting endogenous rnainfarct border zonelong non-coding rnasmicrornamyocardial infarction

Identifiers

PMID32945428
PMCPMC7453657
OpenAlexW3045493933

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.