Evidence map›Paper›PMID 32945168›Full record

ArticleJournal of proteome research2020

Immunoglobulin G Glycoprofiles are Unaffected by Common Bottom-Up Sample Processing.

Manuela Amez-Martín, Manfred Wuhrer, David Falck

Open access · hybridAbstract read
In one paragraph

Article in Journal of proteome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. High-Throughput Glycomic Methods.Chemical reviews · 2022
    Review
  3. Article
  4. Bioinformatics in Immunoglobulin Glycosylation Analysis.Experientia supplementum (2012) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Manuela Amez-MartínCenter of Proteomics and Metabolomics, Leiden University Medical Center, P.O. Box 9600, Postzone, P1-Q, Leiden 2300 RC, The Netherlands.ORCID 0000-0002-5527-3132
Manfred WuhrerCenter of Proteomics and Metabolomics, Leiden University Medical Center, P.O. Box 9600, Postzone, P1-Q, Leiden 2300 RC, The Netherlands.ORCID 0000-0002-0814-4995
David FalckCenter of Proteomics and Metabolomics, Leiden University Medical Center, P.O. Box 9600, Postzone, P1-Q, Leiden 2300 RC, The Netherlands.ORCID 0000-0003-3908-2376
Leiden University Medical Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunoglobulin G (IgG) glycosylation is a key post-translational modification in regulating IgG function. It is therefore a prominent target for biomarker discovery and a critical quality attribute of antibody-based biopharmaceuticals. A common approach for IgG glycosylation analysis is the measurement of tryptic glycopeptides. Glycosylation stability during sample processing is a key prerequisite for an accurate and robust analysis yet has hitherto hardly been studied. Especially, acid hydrolysis of sialic acids may be a source for instability. Therefore, we investigated acid denaturation, centrifugal vacuum concentration, and glycopeptide storage regarding changes in the IgG glycosylation profile. Intravenous IgG was analyzed employing imaginable deviations from a reference method and stress conditions. All glycosylation features -sialylation, galactosylation, bisection, and fucosylation-remained unchanged for most conditions. Only with prolonged exposure to acidic conditions at 37 °C, sialylation decreased significantly and subtle changes occurred for galactosylation. Consequently, provided that long or intense heating in acidic solutions is avoided, sample preparation for bottom-up glycoproteomics does not introduce conceivable biases.

Indexed as

Immunoglobulin GSialic AcidsGlycopeptidesGlycosylationImmunoglobulin Fc FragmentsSpecimen HandlingGlycopeptidesImmunoglobulin Fc FragmentsImmunoglobulin GSialic Acidsacid hydrolysisglycopeptide storageglycoproteomicsglycosylation stabilityimmunoglobulin glycosylation

Identifiers

PMID32945168
PMCPMC7539295
OpenAlexW3087610558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.