Evidence map›Paper›PMID 32943681›Full record

ArticleScientific reports2020

Pyruvate dehydrogenase complex-enzyme 2, a new target for Listeria spp. detection identified using combined phage display technologies.

Gustavo Marçal Schmidt Garcia Moreira, Sarah Mara Stella Köllner, Saskia Helmsing, Lothar Jänsch, Anja Meier, Sabine Gronow, Christian Boedeker, Stefan Dübel, Marcelo Mendonça, Ângela Nunes Moreira and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Mapping Epitopes by Phage Display.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  2. Biomarker Discovery by ORFeome Phage Display.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  3. Article
  4. Bioprospecting by Phage Display of Mimetic Peptides ofInfection and drug resistance · 2022
    Article
  5. Article
  6. Recombinant antibodies and their use for food immunoanalysis.Analytical and bioanalytical chemistry · 2022
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Gustavo Marçal Schmidt Garcia MoreiraAbteilung Biotechnologie, Institut für Biochemie, Biotechnologie und Bioinformatik, Technische Universität Braunschweig, Braunschweig, Lower Saxony, Germany.
Sarah Mara Stella KöllnerAbteilung Biotechnologie, Institut für Biochemie, Biotechnologie und Bioinformatik, Technische Universität Braunschweig, Braunschweig, Lower Saxony, Germany.
Saskia HelmsingAbteilung Biotechnologie, Institut für Biochemie, Biotechnologie und Bioinformatik, Technische Universität Braunschweig, Braunschweig, Lower Saxony, Germany.
Lothar JänschCellular Proteomics, Helmholtz Centre for Infection Research, Braunschweig, Lower Saxony, Germany.
Anja MeierCellular Proteomics, Helmholtz Centre for Infection Research, Braunschweig, Lower Saxony, Germany.
Sabine GronowLeibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Lower Saxony, Germany.
Christian BoedekerLeibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Lower Saxony, Germany.
Stefan DübelAbteilung Biotechnologie, Institut für Biochemie, Biotechnologie und Bioinformatik, Technische Universität Braunschweig, Braunschweig, Lower Saxony, Germany.
Marcelo MendonçaDepartamento de Medicina Veterinária, Universidade Federal do Agreste de Pernambuco, Garanhuns, PE, Brazil.
Ângela Nunes MoreiraLaboratório de Imunologia Aplicada, Núcleo de Biotecnologia, Centro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, RS, Brazil.
Fabricio Rochedo ConceiçãoLaboratório de Imunologia Aplicada, Núcleo de Biotecnologia, Centro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, RS, Brazil.
Michael HustAbteilung Biotechnologie, Institut für Biochemie, Biotechnologie und Bioinformatik, Technische Universität Braunschweig, Braunschweig, Lower Saxony, Germany. m.hust@tu-braunschweig.de.
Technische Universität Braunschweig · DEHelmholtz Centre for Infection Research · DELeibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures · DEUniversidade Federal de Pelotas · BRUniversidade Federal do Agreste de Pernambuco

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Listeria comprises ubiquitous bacteria, commonly present in foods and food production facilities. In this study, three different phage display technologies were employed to discover targets, and to generate and characterize novel antibodies against Listeria: antibody display for biomarker discovery and antibody generation; ORFeome display for target identification; and single-gene display for epitope characterization. With this approach, pyruvate dehydrogenase complex-enzyme 2 (PDC-E2) was defined as a new detection target for Listeria, as confirmed by immunomagnetic separation-mass spectrometry (IMS-MS). Immunoblot and fluorescence microscopy showed that this protein is accessible on the bacterial cell surface of living cells. Recombinant PDC-E2 was produced in E. coli and used to generate 16 additional antibodies. The resulting set of 20 monoclonal scFv-Fc was tested in indirect ELISA against 17 Listeria and 16 non-Listeria species. Two of them provided 100% sensitivity (CI 82.35-100.0%) and specificity (CI 78.20-100.0%), confirming PDC-E2 as a suitable target for the detection of Listeria. The binding region of 18 of these antibodies was analyzed, revealing that ≈ 90% (16/18) bind to the lipoyl domains (LD) of the target. The novel target PDC-E2 and highly specific antibodies against it offer new opportunities to improve the detection of Listeria.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalAntibody SpecificityBacteriophagesCell Surface Display TechniquesEpitopesEscherichia coliImmunoblottingListeriaPeptide LibraryPyruvate Dehydrogenase ComplexSingle-Chain AntibodiesAntibodies, MonoclonalEpitopesPeptide LibraryPyruvate Dehydrogenase ComplexSingle-Chain Antibodies

Identifiers

PMID32943681
PMCPMC7498459
OpenAlexW3087639585

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.