Evidence map›Paper›PMID 32943083›Full record

ArticleBMC research notes2020

Comprehensive transcriptome resource for response to phytohormone-induced signaling in Capsicum annuum L.

Junesung Lee, Jae-Young Nam, Hakgi Jang, Nayoung Kim, Yong-Min Kim, Won-Hee Kang, Seon-In Yeom

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Identification of PepperPlants (Basel, Switzerland) · 2026
    Article
  2. Pan-genome landscape of the JAZ family in pepper (Frontiers in plant science · 2026
    Article
  3. Article
  4. Transcriptome analysis reveals key genes and pathways associated with heat stress in Pleurotus pulmonarius.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Junesung LeeDepartment of Agricultural Plant Science, Division of Applied Life Science (BK21), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Jae-Young NamInstitute of Agriculture & Life Science, Gyeongsang National University, Jinju, 52828, Republic of Korea.
Hakgi JangDepartment of Agricultural Plant Science, Division of Applied Life Science (BK21), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Nayoung KimDepartment of Agricultural Plant Science, Division of Applied Life Science (BK21), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Yong-Min KimGenome Engineering Research Center, Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Won-Hee KangInstitute of Agriculture & Life Science, Gyeongsang National University, Jinju, 52828, Republic of Korea. wh81kang@gmail.com.
Seon-In YeomDepartment of Agricultural Plant Science, Division of Applied Life Science (BK21), Gyeongsang National University, Jinju, 52828, Republic of Korea. sunin78@gnu.ac.kr.ORCID http://orcid.org/0000-0002-8385-0179
Gyeongsang National University · KRKorea Research Institute of Bioscience and Biotechnology · KR

Funding

National Research Foundation of Korea 2015R1A6A1A03031413National Research Foundation of Korea 2019R1C1C1007472National Research Foundation of Korea NRF-2017R1E1A1A01072843
6 · The paper itself

Abstract

objectivesPhytohormones are small signaling molecules with crucial roles in plant growth, development, and environmental adaptation to biotic and abiotic stress responses. Despite several previously published molecular studies focused on plant hormones, our understanding of the transcriptome induced by phytohormones remains unclear, especially in major crops. Here, we aimed to provide transcriptome dataset using RNA sequencing for phytohormone-induced signaling in plant. DATA DESCRIPTION: We used high-throughput RNA sequencing profiling to investigate the pepper plant response to treatment with four major phytohormones (salicylic acid, jasmonic acid, ethylene, and abscisic acid). This dataset yielded 78 samples containing three biological replicates per six different time points for each treatment and the control, constituting 187.8 Gb of transcriptome data (2.4 Gb of each sample). This comprehensive parallel transcriptome data provides valuable information for understanding the relationships and molecular networks that regulate the expression of phytohormone-related genes involved in plant developments and environmental stress adaptation.

Indexed as

CapsicumGene Expression Regulation, PlantPlant Growth RegulatorsPlant ProteinsStress, PhysiologicalTranscriptomePlant Growth RegulatorsPlant ProteinsCapsicum annuumEnvironmental stressesPhytohormone signalingTranscriptome

Identifiers

PMID32943083
PMCPMC7499990
OpenAlexW3087397141

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.