Evidence map›Paper›PMID 32941651›Full record

ArticleNucleic acids research2020

eIF4G-driven translation initiation of downstream ORFs in mammalian cells.

Risa Nobuta, Kodai Machida, Misaki Sato, Satoshi Hashimoto, Yasuhito Toriumi, Shizuka Nakajima, Daiki Suto, Hiroaki Imataka, Toshifumi Inada

Abstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Risa NobutaGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Kodai MachidaDepartment of Applied Chemistry, Graduate School of Engineering, University of Hyogo, Himeji 671-2280, Japan.
Misaki SatoGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Satoshi HashimotoGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Yasuhito ToriumiGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Shizuka NakajimaGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Daiki SutoGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Hiroaki ImatakaDepartment of Applied Chemistry, Graduate School of Engineering, University of Hyogo, Himeji 671-2280, Japan.
Toshifumi InadaGraduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comprehensive genome-wide analysis has revealed the presence of translational elements in the 3' untranslated regions (UTRs) of human transcripts. However, the mechanisms by which translation is initiated in 3' UTRs and the physiological function of their products remain unclear. This study showed that eIF4G drives the translation of various downstream open reading frames (dORFs) in 3' UTRs. The 3' UTR of GCH1, which encodes GTP cyclohydrolase 1, contains an internal ribosome entry site (IRES) that initiates the translation of dORFs. An in vitro reconstituted translation system showed that the IRES in the 3' UTR of GCH1 required eIF4G and conventional translation initiation factors, except eIF4E, for AUG-initiated translation of dORFs. The 3' UTR of GCH1-mediated translation was resistant to the mTOR inhibitor Torin 1, which inhibits cap-dependent initiation by increasing eIF4E-unbound eIF4G. eIF4G was also required for the activity of various elements, including polyU and poliovirus type 2, a short element thought to recruit ribosomes by base-pairing with 18S rRNA. These findings indicate that eIF4G mediates translation initiation of various ORFs in mammalian cells, suggesting that the 3' UTRs of mRNAs may encode various products.

Indexed as

3' Untranslated RegionsEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4GGTP CyclohydrolaseHumansNaphthyridinesOpen Reading FramesPoliovirusProtein BiosynthesisRibosomesRNA CapsRNA, MessengerRNA, Ribosomal, 18STOR Serine-Threonine Kinases1-(4-(4-propionylpiperazin-1-yl)-3-(trifluoromethyl)phenyl)-9-(quinolin-3-yl)benzo(h)(1,6)naphthyridin-2(1H)-one3' Untranslated RegionsEIF4G1 protein, humanEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4GGCH1 protein, humanGTP CyclohydrolaseMTOR protein, humanNaphthyridinesRNA CapsRNA, MessengerRNA, Ribosomal, 18STOR Serine-Threonine Kinases

Identifiers

PMID32941651
PMCPMC7544200

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.