Evidence map›Paper›PMID 32941003›Full record

ArticleBiochemistry2020

Substrate-Dependent Modulation of SIRT2 by a Fluorescent Probe, 1-Aminoanthracene.

David Bi, Jie Yang, Jun Young Hong, Prashit Parikh, Nicole Hinds, Joseph Infanti, Hening Lin, Brian P Weiser

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  8. A Conserved Mechanism for Hormesis in Molecular Systems.Dose-response : a publication of International Hormesis Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

David BiDepartment of Molecular Biology, Rowan University School of Osteopathic Medicine, Stratford, New Jersey 08084, United States.
Jie YangDepartment of Molecular Biology, Rowan University School of Osteopathic Medicine, Stratford, New Jersey 08084, United States.
Jun Young HongDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Prashit ParikhDepartment of Molecular Biology, Rowan University School of Osteopathic Medicine, Stratford, New Jersey 08084, United States.
Nicole HindsDepartment of Molecular Biology, Rowan University School of Osteopathic Medicine, Stratford, New Jersey 08084, United States.
Joseph InfantiDepartment of Molecular Biology, Rowan University School of Osteopathic Medicine, Stratford, New Jersey 08084, United States.
Hening LinDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.ORCID 0000-0002-0255-2701
Brian P WeiserDepartment of Molecular Biology, Rowan University School of Osteopathic Medicine, Stratford, New Jersey 08084, United States.ORCID 0000-0002-7548-0737
Rowan University · USCornell University · USHoward Hughes Medical Institute · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Sirtuin isoform 2 (SIRT2) is an enzyme that catalyzes the removal of acyl groups from lysine residues. SIRT2's catalytic domain has a hydrophobic tunnel where its substrate acyl groups bind. Here, we report that the fluorescent probe 1-aminoanthracene (AMA) binds within SIRT2's hydrophobic tunnel in a substrate-dependent manner. AMA's interaction with SIRT2 was characterized by its enhanced fluorescence upon protein binding (>10-fold). AMA interacted weakly with SIRT2 alone in solution (

Indexed as

AnthracenesFluorescent DyesHumansLigandsMolecular Docking SimulationPeptidesProtein BindingRecombinant ProteinsSirtuin 2Substrate Specificity1-aminoanthraceneAnthracenesFluorescent DyesLigandsPeptidesRecombinant ProteinsSirtuin 2

Identifiers

PMID32941003
PMCPMC7880049
OpenAlexW3087068219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.