Evidence map›Paper›PMID 32939948›Full record

ArticleMolecular plant pathology2020

Plant nitrogen supply affects the Botrytis cinerea infection process and modulates known and novel virulence factors.

Marie-Christine Soulie, Shamsuddin Mia Koka, Kévin Floch, Baptiste Vancostenoble, Deborah Barbe, Antoine Daviere, Ludivine Soubigou-Taconnat, Veronique Brunaud, Nathalie Poussereau, Elise Loisel and 3 more

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

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  9. Horticulture research · 2023
    Article
  10. Does Potassium (KInternational journal of molecular sciences · 2022
    Review
  11. Differential Metabolomics Reveals Pathogenesis ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Marie-Christine SoulieSorbonne Universités, UPMC Université Paris 06, Paris, France.ORCID 0000-0002-1665-1591
Shamsuddin Mia KokaInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.
Kévin FlochInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.
Baptiste VancostenobleInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.
Deborah BarbeInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.
Antoine DaviereInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.
Ludivine Soubigou-TaconnatInstitute of Plant Sciences Paris-Saclay, CNRS, INRA, Université Paris-Sud, Université d'Evry, Université Paris-Saclay, Gif sur Yvette, France.
Veronique BrunaudInstitute of Plant Sciences Paris-Saclay, CNRS, INRA, Université Paris-Sud, Université d'Evry, Université Paris-Saclay, Gif sur Yvette, France.
Nathalie PoussereauUniv Lyon, Université Lyon 1, CNRS, Bayer SAS, UMR5240, Pathogénie, Lyon, France.
Elise LoiselUniv Lyon, Université Lyon 1, CNRS, Bayer SAS, UMR5240, Pathogénie, Lyon, France.
Amelie DevalleeUniv Lyon, Université Lyon 1, CNRS, Bayer SAS, UMR5240, Pathogénie, Lyon, France.
Dominique ExpertInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.
Mathilde FagardInstitut Jean-Pierre Bourgin, INRAE, Université Paris-Saclay, Versailles, France.ORCID 0000-0001-7452-6337
Université Paris-Saclay · FRUniversité Claude Bernard Lyon 1 · FRUniversité Paris-Sud · FRUniversité Paris Cité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant nitrogen (N) fertilization is known to affect disease; however, the underlying mechanisms remain mostly unknown. We investigated the impact of N supply on the Arabidopsis thaliana-Botrytis cinerea interaction. A. thaliana plants grown in low nitrate were more tolerant to all wild-type B. cinerea strains tested. We determined leaf nitrate concentrations and showed that they had a limited impact on B. cinerea growth in vitro. For the first time, we performed a dual RNA-Seq of infected leaves of plants grown with different nitrate concentrations. Transcriptome analysis showed that plant and fungal transcriptomes were marginally affected by plant nitrate supply. Indeed, only a limited set of plant (182) and fungal (22) genes displayed expression profiles altered by nitrate supply. The expression of selected genes was confirmed by quantitative reverse transcription PCR at 6 hr postinfection (hpi) and analysed at a later time point (24 hpi). We selected three of the 22 B. cinerea genes identified for further analysis. B. cinerea mutants affected in these genes were less aggressive than the wild-type strain. We also showed that plants grown in ammonium were more tolerant to B. cinerea. Furthermore, expression of the selected B. cinerea genes in planta was altered when plants were grown with ammonium instead of nitrate, demonstrating an impact of the nature of N supplied to plants on the interaction. Identification of B. cinerea genes expressed differentially in planta according to plant N supply unveils two novel virulence functions required for full virulence in A. thaliana: a secondary metabolite (SM) and an acidic protease (AP).

Indexed as

TranscriptomeAmmonium CompoundsArabidopsisBotrytisGene Expression ProfilingGene Expression Regulation, PlantHost-Pathogen InteractionsMutationNitratesNitrogenPlant DiseasesPlant LeavesVirulenceVirulence FactorsAmmonium CompoundsNitratesNitrogenVirulence FactorsArabidopsis thalianaBotrytis cinereadefencesnitrogenvirulence factors

Identifiers

PMID32939948
PMCPMC7549004
OpenAlexW3084711464

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.