Evidence map›Paper›PMID 32939549›Full record

Observational studyThe Journal of nutrition2020

Associations between Plasma Choline Metabolites and Genetic Polymorphisms in One-Carbon Metabolism in Postmenopausal Women: The Women's Health Initiative Observational Study.

Mmadili N Ilozumba, Ting-Yuan D Cheng, Marian L Neuhouser, Joshua W Miller, Shirley A A Beresford, David J Duggan, Adetunji T Toriola, Xiaoling Song, Yingye Zheng, Lynn B Bailey and 5 more

Open access · greenAbstract readObservational Study
In one paragraph

Observational study in The Journal of nutrition, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 1 country.

Mmadili N IlozumbaDepartment of Epidemiology, University of Florida, Gainesville, FL, USA.
Ting-Yuan D ChengDepartment of Epidemiology, University of Florida, Gainesville, FL, USA.
Marian L NeuhouserPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Joshua W MillerDepartment of Nutritional Sciences, Rutgers University, New Brunswick, NJ, USA.
Shirley A A BeresfordPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
David J DugganTranslational Genomics Research Institute, Phoenix, AZ, USA.
Adetunji T ToriolaDivision of Public Health Sciences, Department of Surgery, Washington University School of Medicine, St. Louis, MO, USA.
Xiaoling SongPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Yingye ZhengPublic Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Lynn B BaileyDepartment of Foods and Nutrition, University of Georgia, Athens, GA, USA.
Aladdin H ShadyabDepartment of Family Medicine and Public Health, University of California, San Diego, La Jolla, CA, USA.
Simin LiuDepartment of Epidemiology, Brown University, Providence, RI, USA.
Olga MalyshevaDivision of Nutritional Sciences, Cornell University, Ithaca, NY, USA.
Marie A CaudillDivision of Nutritional Sciences, Cornell University, Ithaca, NY, USA.
Cornelia M UlrichHuntsman Cancer Institute, Salt Lake City, UT, USA.
Fred Hutch Cancer Center · USCornell University · USUniversity of Florida · USBrown University · USRutgers, The State University of New Jersey · USTranslational Genomics Research Institute · USUniversity of California, San Diego · USUniversity of Georgia · USUniversity of Utah · USWashington University in St. Louis · US

Funding

Translational Research Support CoreP30ES005022 · NIEHS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Debra L Laskin · 1988 to 2026
$47.4M
A Prospective Study of Colorectal Cancer: One-Carbon Metabolism and InflammationR01CA120523 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ULRICH, CORNELIA M · 2008 to 2012
$3.0M
mTOR pathway in breast cancer subtypes by race: A molecular pathological studyK07CA201334 · NCI · UNIVERSITY OF FLORIDA · PI CHENG, TING-YUAN · 2016 to 2020
$693k
NCI NIH HHS K07 CA201334NCI NIH HHS R01 CA120523NHLBI NIH HHS HHSN268201100001INHLBI NIH HHS HHSN268201100002INHLBI NIH HHS HHSN268201100004INHLBI NIH HHS HHSN268201100046CNIA NIH HHS HHSN271201100004CNIEHS NIH HHS P30 ES005022WHI NIH HHS HHSN268201100001CWHI NIH HHS HHSN268201100002CWHI NIH HHS HHSN268201100004C
6 · The paper itself

Abstract

backgroundCholine plays an integral role in one-carbon metabolism in the body, but it is unclear whether genetic polymorphisms are associated with variations in plasma choline and its metabolites.

objectivesThis study aimed to evaluate the association of genetic variants in choline and one-carbon metabolism with plasma choline and its metabolites.

methodsWe analyzed data from 1423 postmenopausal women in a case-control study nested within the Women's Health Initiative Observational Study. Plasma concentrations of choline, betaine, dimethylglycine (DMG), and trimethylamine N-oxide were determined in 12-h fasting blood samples collected at baseline (1993-1998). Candidate and tagging single-nucleotide polymorphisms (SNPs) were genotyped in betaine-homocysteine S-methyltransferase (BHMT), BHMT2, 5,10-methylenetetrahydrofolate reductase (MTHFR), methylenetetrahydrofolate dehydrogenase (NADP+ dependent 1) (MTHFD1), 5-methyltetrahydrofolate-homocysteine methyltransferase (MTR), and 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (MTRR). Linear regression was used to derive percentage difference in plasma concentrations per variant allele, adjusting for confounders, including B-vitamin biomarkers. Potential effect modification by plasma vitamin B-12, vitamin B-6, and folate concentrations and folic-acid fortification periods was examined.

resultsThe candidate SNP BHMT R239Q (rs3733890) was associated with lower concentrations of plasma betaine and DMG concentrations (-4.00% and -6.75% per variant allele, respectively; both nominal P < 0.05). Another candidate SNP, BHMT2 rs626105 A>G, was associated with higher plasma DMG concentration (13.0%; P < 0.0001). Several tagSNPs in these 2 genes were associated with plasma concentrations after correction for multiple comparisons. Vitamin B-12 status was a significant effect modifier of the association between the genetic variant BHMT2 rs626105 A>G and plasma DMG concentration.

conclusionsGenetic variations in metabolic enzymes were associated with plasma concentrations of choline and its metabolites. Our findings contribute to the knowledge on the variation in blood nutrient concentrations in postmenopausal women.

Indexed as

Polymorphism, Single NucleotidePostmenopauseAgedBiomarkersCase-Control StudiesCholineColorectal NeoplasmsFemaleGene Expression Regulation, EnzymologicGenetic VariationHumansMiddle AgedOne-Carbon Group TransferasesOxidoreductasesRisk FactorsBiomarkersCholineOne-Carbon Group TransferasesOxidoreductasesbetainecholine metabolismdimethylglycinegenetic variantsone-carbon metabolismpostmenopausal women

Identifiers

PMID32939549
PMCPMC7675024
OpenAlexW3087364621

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.