Evidence map›Paper›PMID 32938759›Full record

ArticleJournal of virology2020

Sphingomyelin Is Essential for the Structure and Function of the Double-Membrane Vesicles in Hepatitis C Virus RNA Replication Factories.

Hossam Gewaid, Haruyo Aoyagi, Minetaro Arita, Koichi Watashi, Ryosuke Suzuki, Shota Sakai, Keigo Kumagai, Toshiyuki Yamaji, Masayoshi Fukasawa, Fumihiro Kato and 8 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 38 citations in OpenAlex.

  1. Trial
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  7. Regulation of cellular and systemic sphingolipid homeostasis.Nature reviews. Molecular cell biology · 2024
    Review
  8. Article
  9. Article
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  11. Article
  12. Article
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  19. Ceramide and Related Molecules in Viral Infections.International journal of molecular sciences · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Hossam GewaidDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Haruyo AoyagiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Minetaro AritaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Koichi WatashiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Ryosuke SuzukiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Shota SakaiDepartment of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan.
Keigo KumagaiDepartment of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan.
Toshiyuki YamajiDepartment of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan.
Masayoshi FukasawaDepartment of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan.
Fumihiro KatoDepartment of Virology III, National Institute of Infectious Diseases, Tokyo, Japan.
Takayuki HishikiDepartment of Microbiology, Kanagawa Prefectural Institute of Public Health, Kanagawa, Japan.
Ayako MimataResearch Center for Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Yuriko SakamakiResearch Center for Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Shizuko IchinoseResearch Center for Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Kentaro HanadaDepartment of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Tokyo, Japan.
Masamichi MuramatsuDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Takaji WakitaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Hideki AizakiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan aizaki@niid.go.jp.ORCID 0000-0002-8346-4729
National Institute of Infectious Diseases · JPTokyo Medical and Dental University · JPKanagawa Prefectural Institute of Public Health · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some plus-stranded RNA viruses generate double-membrane vesicles (DMVs), one type of the membrane replication factories, as replication sites. Little is known about the lipid components involved in the biogenesis of these vesicles. Sphingomyelin (SM) is required for hepatitis C virus (HCV) replication, but the mechanism of SM involvement remains poorly understood. SM biosynthesis starts in the endoplasmic reticulum (ER) and gives rise to ceramide, which is transported from the ER to the Golgi by the action of ceramide transfer protein (CERT), where it can be converted to SM. In this study, inhibition of SM biosynthesis, either by using small-molecule inhibitors or by knockout (KO) of CERT, suppressed HCV replication in a genotype-independent manner. This reduction in HCV replication was rescued by exogenous SM or ectopic expression of the CERT protein, but not by ectopic expression of nonfunctional CERT mutants. Observing low numbers of DMVs in stable replicon cells treated with a SM biosynthesis inhibitor or in CERT-KO cells transfected with either HCV replicon or with constructs that drive HCV protein production in a replication-independent system indicated the significant importance of SM to DMVs. The degradation of SM of the

Indexed as

Biological TransportCarrier ProteinsCell LineCeramidesEndoplasmic ReticulumGene Knockout TechniquesGolgi ApparatusHEK293 CellsHepacivirusHepatitis CHumansPhosphatidylinositol PhosphatesRNA, ViralSphingomyelinsVirus ReplicationCarrier ProteinsCeramidesphosphatidylinositol 4-phosphatePhosphatidylinositol PhosphatesRNA, ViralSphingomyelinsceramide transfer proteindouble-membrane vesicleshepatitis C virusphosphatidylinositol 4-phosphatereplicationsphingomyelinvesicle-associated membrane protein-associated protein

Identifiers

PMID32938759
PMCPMC7654263
OpenAlexW3086058250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.