Evidence map›Paper›PMID 32938439›Full record

ArticleBMC biology2020

A non-photosynthetic green alga illuminates the reductive evolution of plastid electron transport systems.

Motoki Kayama, Jun-Feng Chen, Takashi Nakada, Yoshiki Nishimura, Toshiharu Shikanai, Tomonori Azuma, Hideaki Miyashita, Shinichi Takaichi, Yuichiro Kashiyama, Ryoma Kamikawa

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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  6. The plastomes ofPlant direct · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Motoki KayamaGraduate School of Human and Environmental Studies, Kyoto University, Yoshida nihonmatsu cho, Sakyo ku, Kyoto, Kyoto, 606-8501, Japan.
Jun-Feng ChenGraduate School of Human and Environmental Studies, Kyoto University, Yoshida nihonmatsu cho, Sakyo ku, Kyoto, Kyoto, 606-8501, Japan.
Takashi NakadaInstitute for Advanced Biosciences, Keio University, Tsuruoka, Japan.
Yoshiki NishimuraGraduate School of Science, Kyoto University, Kyoto, Japan.
Toshiharu ShikanaiGraduate School of Science, Kyoto University, Kyoto, Japan.
Tomonori AzumaGraduate School of Human and Environmental Studies, Kyoto University, Yoshida nihonmatsu cho, Sakyo ku, Kyoto, Kyoto, 606-8501, Japan.
Hideaki MiyashitaGraduate School of Human and Environmental Studies, Kyoto University, Yoshida nihonmatsu cho, Sakyo ku, Kyoto, Kyoto, 606-8501, Japan.
Shinichi TakaichiDepartment of Molecular Microbiology, Tokyo University of Agriculture, Tokyo, Japan.
Yuichiro KashiyamaGraduate School of Engineering, Fukui University of Technology, Fukui, Japan.
Ryoma KamikawaGraduate School of Human and Environmental Studies, Kyoto University, Yoshida nihonmatsu cho, Sakyo ku, Kyoto, Kyoto, 606-8501, Japan. kamikawa.ryoma.7v@kyoto-u.ac.jp.
Kyoto University · JPFukui University of Technology · JPKeio University · JPTokyo University of Agriculture · JP

Funding

Japan Society for the Promotion of Science 18H03743Japan Society for the Promotion of Science 19H03274The Yanmar Environmental Sustainability Support Association KI019045
6 · The paper itself

Abstract

backgroundPlastid electron transport systems are essential not only for photosynthesis but also for dissipating excess reducing power and sinking excess electrons generated by various redox reactions. Although numerous organisms with plastids have lost their photoautotrophic lifestyles, there is a spectrum of known functions of remnant plastids in non-photosynthetic algal/plant lineages; some of non-photosynthetic plastids still retain diverse metabolic pathways involving redox reactions while others, such as apicoplasts of apicomplexan parasites, possess highly reduced sets of functions. However, little is known about underlying mechanisms for redox homeostasis in functionally versatile non-photosynthetic plastids and thus about the reductive evolution of plastid electron transport systems.

resultsHere we demonstrated that the central component for plastid electron transport systems, plastoquinone/plastoquinol pool, is still retained in a novel strain of an obligate heterotrophic green alga lacking the photosynthesis-related thylakoid membrane complexes. Microscopic and genome analyses revealed that the Volvocales green alga, chlamydomonad sp. strain NrCl902, has non-photosynthetic plastids and a plastid DNA that carries no genes for the photosynthetic electron transport system. Transcriptome-based in silico prediction of the metabolic map followed by liquid chromatography analyses demonstrated carotenoid and plastoquinol synthesis, but no trace of chlorophyll pigments in the non-photosynthetic green alga. Transient RNA interference knockdown leads to suppression of plastoquinone/plastoquinol synthesis. The alga appears to possess genes for an electron sink system mediated by plastid terminal oxidase, plastoquinone/plastoquinol, and type II NADH dehydrogenase. Other non-photosynthetic algae/land plants also possess key genes for this system, suggesting a broad distribution of an electron sink system in non-photosynthetic plastids.

conclusionThe plastoquinone/plastoquinol pool and thus the involved electron transport systems reported herein might be retained for redox homeostasis and might represent an intermediate step towards a more reduced set of the electron transport system in many non-photosynthetic plastids. Our findings illuminate a broadly distributed but previously hidden step of reductive evolution of plastid electron transport systems after the loss of photosynthesis.

Indexed as

Evolution, MolecularChlorophyceaeElectron TransportPhotosynthesisPlastidsCarotenoidNADPHNon-photosynthetic plastidPlastid terminal oxidasePlastoquinolTransient RNA interference knockdown

Identifiers

PMID32938439
PMCPMC7495860
OpenAlexW3086198605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.