ArticleBMC genomics2020
Full-length genome sequence of segmented RNA virus from ticks was obtained using small RNA sequencing data.
Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed, 18 citations in OpenAlex.
- Distribution prediction of the habitat of Jingmen tick virus in China.Microbiology spectrum · 2025Article
- Discovery and vertical transmission analysis of Dabieshan Tick Virus inFrontiers in microbiology · 2024Article
- Identification and phylogenetic analysis of Jingmen tick virus in Jiangxi Province, China.Frontiers in veterinary science · 2024Article
- Virome analysis of ticks and tick-borne viruses in Heilongjiang and Jilin Provinces, China.Virus research · 2023Article
- Article
- Whole-genome sequencing and genetic diversity of severe fever with thrombocytopenia syndrome virus using multiplex PCR-based nanopore sequencing, Republic of Korea.PLoS neglected tropical diseases · 2022Article
- RNA-viromics reveals diverse communities of soil RNA viruses with the potential to affect grassland ecosystems across multiple trophic levels.ISME communications · 2022Article
- Jingmenviruses: Ubiquitous, understudied, segmented flavi-like viruses.Frontiers in microbiology · 2022Review
- Full-Length Genome of anFrontiers in microbiology · 2022Article
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Authors and funding
10 authors at 4 institutions in 2 countries.
Funding
Abstract
backgroundIn 2014, a novel tick-borne virus of the Flaviviridae family was first reported in the Mogiana region of Brazil and named the Mogiana tick virus (MGTV). Thereafter, the Jingmen tick virus (JMTV), Kindia tick virus (KITV), and Guangxi tick virus (GXTV)-evolutionarily related to MGTV-were reported.
resultsIn the present study, we used small RNA sequencing (sRNA-seq) to detect viruses in ticks and discovered a new MGTV strain in Amblyomma testudinarium ticks collected in China's Yunnan Province in 2016. We obtained the full-length genome sequence of this MGTV strain Yunnan2016 (GenBank: MT080097, MT080098, MT080099 and MT080100) and recommended it for its inclusion in the NCBI RefSeq database for future studies on MGTV, JMTV, KITV and GXTV. Phylogenetic analysis showed that MGTV, JMTV, KITV and GXTV are monophyletic and belong to a MGTV group. Furthermore, this MGTV group of viruses may be phylogenetically related to geographical regions that were formerly part of the supercontinents Gondwana and Laurasia.
conclusionsTo the best of our knowledge, this is the first study in which 5' and 3' sRNAs were used to generate full-length genome sequences of, but not limited to, RNA viruses. We also demonstrated the feasibility of using the sRNA-seq based method for the detection of viruses in pooled two and even possible one small ticks. MGTV may preserve the characteristic of ancient RNA viruses, which can be used to study the origin and evolution of RNA viruses. In addition, MGTV can be used as novel species for studies in phylogeography.
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