Evidence map›Paper›PMID 32938364›Full record

ArticleBMC bioinformatics2020

Developing the novel bioinformatics algorithms to systematically investigate the connections among survival time, key genes and proteins for Glioblastoma multiforme.

Yujie You, Xufang Ru, Wanjing Lei, Tingting Li, Ming Xiao, Huiru Zheng, Yujie Chen, Le Zhang

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in BMC bioinformatics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  5. An integrated platform forFrontiers in genetics · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Yujie YouCollege of Computer Science, Sichuan University, Chengdu, 610065, China.
Xufang RuDepartment of Neurosurgery, Southwest Hospital, Third Military Medical University, Chongqing, P.R. China.
Wanjing LeiCollege of Computer Science, Sichuan University, Chengdu, 610065, China.
Tingting LiCollege of Mathematics and Statistics, Southwest University, Chongqing, 400715, P.R. China.
Ming XiaoCollege of Computer Science, Sichuan University, Chengdu, 610065, China.
Huiru ZhengSchool of Computing, Ulster University, Coleraine, Londonderry, Northern Ireland, UK.
Yujie ChenDepartment of Neurosurgery, Southwest Hospital, Third Military Medical University, Chongqing, P.R. China. yujiechen6886@foxmail.com.
Le ZhangCollege of Computer Science, Sichuan University, Chengdu, 610065, China. zhangle06@scu.edu.cn.
Sichuan University · CNSouthwest Hospital · CNSouthwest University · CNUniversity of Ulster · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlioblastoma multiforme (GBM) is one of the most common malignant brain tumors and its average survival time is less than 1 year after diagnosis.

resultsFirstly, this study aims to develop the novel survival analysis algorithms to explore the key genes and proteins related to GBM. Then, we explore the significant correlation between AEBP1 upregulation and increased EGFR expression in primary glioma, and employ a glioma cell line LN229 to identify relevant proteins and molecular pathways through protein network analysis. Finally, we identify that AEBP1 exerts its tumor-promoting effects by mainly activating mTOR pathway in Glioma.

conclusionsWe summarize the whole process of the experiment and discuss how to expand our experiment in the future.

Indexed as

AlgorithmsBrain NeoplasmsComputational BiologyGlioblastomaGliomaHumansSurvival AnalysisAdipocyte enhancer-binding protein 1 (AEBP1)Data miningGlioblastoma multiforme (GBM)mTOR pathwaySurvival analysis

Identifiers

PMID32938364
PMCPMC7646399
OpenAlexW3086863602

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.