Evidence map›Paper›PMID 32935881›Full record

ArticleJournal of veterinary internal medicine2020

Precision medicine identifies a pathogenic variant of the ITGA2B gene responsible for Glanzmann's thrombasthenia in a cat.

Ronald H L Li, Eric Ontiveros, Nghi Nguyen, Joshua A Stern, Elizabeth Lee, Brian T Hardy, 99 Lives Cat Genome Consortium

Open access · goldAbstract readCase Reports
In one paragraph

Article in Journal of veterinary internal medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ronald H L LiDepartment of Veterinary Surgical and Radiological Sciences, School of Veterinary Medicine, University of California, Davis, Davis, California, USA.ORCID https://orcid.org/0000-0002-3325-2744
Eric OntiverosDepartment of Veterinary Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, Davis, California, USA.
Nghi NguyenDepartment of Veterinary Surgical and Radiological Sciences, School of Veterinary Medicine, University of California, Davis, Davis, California, USA.
Joshua A SternDepartment of Veterinary Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, Davis, California, USA.
Elizabeth LeeVeterinary Medical Teaching Hospital, School of Veterinary Medicine, University of California, Davis, Davis, California, USA.
Brian T HardyDepartment of Veterinary Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, Davis, California, USA.
99 Lives Cat Genome Consortium
University of California, Davis · USVeterinary Medical Teaching Hospital · US

Funding

Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DEPINHO, RONALD ANTHONY · 2003 to 2012
$20.3M
Center for Companion Animal Health, University of California, Davis 2019-30-FMaxine Adler Graduate Fellowship for Eric OntiverosNCI NIH HHS P01 CA095616
6 · The paper itself

Abstract

backgroundA nonpedigreed male cat presented with epistaxis, severe bladder hemorrhage, and secondary urethral obstruction after cystocentesis.

objectivesTo characterize the phenotype of a cat with bleeding diathesis and use a precision medicine approach to identify the molecular genetic defect by whole genome sequencing.

methodsAdenosine diphosphate (ADP) and arachidonic acid (AA)-induced whole blood platelet aggregometry was performed in the affected cat and a healthy cat. Platelet activation, measured by P-selectin expression, and surface integrin subunit β3 expression were evaluated by flow cytometry in the affected cat and healthy control. Total integrin subunit αIIb expression was assessed by western blot. Whole genome sequencing at 30× coverage was used to identify genetic variants that segregated in the affected cat compared to 194 cats from the 99 Lives Sequencing Consortium.

resultsPlatelet aggregometry identified significant impairment in platelet aggregation in response to ADP and AA compared to the control cat. Targeted protein expression analyses by flow cytometry and immunoblot analysis determined that the surface expression and total expression of the integrin, αIIbβ3, was absent. Whole genome sequencing identified a homozygous c.1986delC frameshift variant in the integrin subunit αIIb (ITGA2B) gene that was not detected in the control population. The p.Pro662fs (ITGA2B P662X) variant terminates translation of the protein at the extracellular domain of the integrin prematurely, which is predicted to affect expression of the β3 unit. CONCLUSIONS AND CLINICAL IMPORTANCE: This novel ITGA2B variant and the associated phenotype closely resemble Glanzmann's thrombasthenia, which has never been reported in cats.

Indexed as

Cat DiseasesThrombastheniaAnimalsCatsIntegrin alpha2Integrin beta3MalePlatelet Function TestsPlatelet Glycoprotein GPIIb-IIIa ComplexPrecision MedicineIntegrin alpha2Integrin beta3Platelet Glycoprotein GPIIb-IIIa ComplexGlanzmann's thrombastheniaintegrin αIIbβ3ITGA2Bwhole genome sequencing

Identifiers

PMID32935881
PMCPMC7694846
OpenAlexW3087402481

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.