Evidence map›Paper›PMID 32935357›Full record

ArticleThe EMBO journal2020

MSH2 shapes the meiotic crossover landscape in relation to interhomolog polymorphism in Arabidopsis.

Alexander R Blackwell, Julia Dluzewska, Maja Szymanska-Lejman, Stuart Desjardins, Andrew J Tock, Nadia Kbiri, Christophe Lambing, Emma J Lawrence, Tomasz Bieluszewski, Beth Rowan and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 97 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Alexander R Blackwell *Department of Plant Sciences, University of Cambridge, Cambridge, UK.ORCID 0000-0002-0369-4584
Julia Dluzewska *Laboratory of Genome Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznan, Poland.ORCID 0000-0002-7419-5934
Maja Szymanska-LejmanLaboratory of Genome Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznan, Poland.ORCID 0000-0003-4813-3278
Stuart DesjardinsDepartment of Genetics and Genome Biology, University of Leicester, Leicester, UK.ORCID 0000-0002-3749-1873
Andrew J TockDepartment of Plant Sciences, University of Cambridge, Cambridge, UK.ORCID 0000-0002-6590-8314
Nadia KbiriLaboratory of Genome Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznan, Poland.ORCID 0000-0001-6816-8369
Christophe LambingDepartment of Plant Sciences, University of Cambridge, Cambridge, UK.ORCID 0000-0001-5218-4217
Emma J LawrenceDepartment of Plant Sciences, University of Cambridge, Cambridge, UK.
Tomasz BieluszewskiLaboratory of Genome Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznan, Poland.
Beth RowanDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.ORCID 0000-0001-7240-4889
James D HigginsDepartment of Genetics and Genome Biology, University of Leicester, Leicester, UK.
Piotr A ZiolkowskiLaboratory of Genome Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznan, Poland.ORCID 0000-0001-7673-6565
Ian R HendersonDepartment of Plant Sciences, University of Cambridge, Cambridge, UK.ORCID 0000-0001-5066-1489
Adam Mickiewicz University in Poznań · PLUniversity of Cambridge · GBUniversity of Leicester · GBMax Planck Institute for Developmental Biology · DE

Funding

Biotechnology and Biological Sciences Research Council BB/N007557/1EC | FP7 | FP7 Ideas: European Research Council (FP7 Ideas)Foundation for Polish Science POIR.04.04.00-00-5C0F/17-00Gatsby Charitable FoundationMax Planck SocietyPolish National Science Centre 2016/21/B/NZ2/01757Polish National Science Centre 2016/22/E/NZ2/00455UK Research and Innovation | Biotechnology and Biological Sciences Research Council (BBSRC) BB/N002628/1
6 · The paper itself

Abstract

During meiosis, DNA double-strand breaks undergo interhomolog repair to yield crossovers between homologous chromosomes. To investigate how interhomolog sequence polymorphism affects crossovers, we sequenced multiple recombinant populations of the model plant Arabidopsis thaliana. Crossovers were elevated in the diverse pericentromeric regions, showing a local preference for polymorphic regions. We provide evidence that crossover association with elevated diversity is mediated via the Class I crossover formation pathway, although very high levels of diversity suppress crossovers. Interhomolog polymorphism causes mismatches in recombining molecules, which can be detected by MutS homolog (MSH) mismatch repair protein heterodimers. Therefore, we mapped crossovers in a msh2 mutant, defective in mismatch recognition, using multiple hybrid backgrounds. Although total crossover numbers were unchanged in msh2 mutants, recombination was remodelled from the diverse pericentromeres towards the less-polymorphic sub-telomeric regions. Juxtaposition of megabase heterozygous and homozygous regions causes crossover remodelling towards the heterozygous regions in wild type Arabidopsis, but not in msh2 mutants. Immunostaining showed that MSH2 protein accumulates on meiotic chromosomes during prophase I, consistent with MSH2 regulating meiotic recombination. Our results reveal a pro-crossover role for MSH2 in regions of higher sequence diversity in A. thaliana.

Indexed as

Polymorphism, GeneticArabidopsisArabidopsis ProteinsCell CycleChromatinChromosomesCrossing Over, GeneticDNA RepairDNA ReplicationHomologous RecombinationMeiosisMutagenesisMutS Homolog 2 ProteinPolymorphism, Single NucleotideArabidopsis ProteinsChromatinMSH2 protein, ArabidopsisMutS Homolog 2 ProteinArabidopsiscrossovermeiosisMSH2polymorphism

Identifiers

PMID32935357
PMCPMC7604573
OpenAlexW3084651323

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.