Evidence map›Paper›PMID 32934357›Full record

ArticleThe ISME journal2020

Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris.

Bo Wu, Feifei Liu, Aifen Zhou, Juan Li, Longfei Shu, Megan L Kempher, Xueqin Yang, Daliang Ning, Feiyan Pan, Grant M Zane and 7 more

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 3 countries.

Bo WuEnvironmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, 510006, China.ORCID http://orcid.org/0000-0003-0666-2892
Feifei LiuInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.ORCID http://orcid.org/0000-0003-1966-8759
Aifen ZhouInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.
Juan LiCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, China.
Longfei ShuEnvironmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, 510006, China.ORCID http://orcid.org/0000-0001-9683-906X
Megan L KempherInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.ORCID http://orcid.org/0000-0003-2992-9625
Xueqin YangEnvironmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, 510006, China.
Daliang NingInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.ORCID http://orcid.org/0000-0002-3368-5988
Feiyan PanInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.
Grant M ZaneDepartments of Biochemistry and Molecular Microbiology & Immunology, University of Missouri-Columbia, Columbia, MO, 65211, USA.ORCID http://orcid.org/0000-0002-3357-3097
Judy D WallDepartments of Biochemistry and Molecular Microbiology & Immunology, University of Missouri-Columbia, Columbia, MO, 65211, USA.ORCID http://orcid.org/0000-0002-9152-5544
Joy D Van NostrandInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.ORCID http://orcid.org/0000-0001-9548-6450
Philippe JuneauDépartment des Sciences Biologiques, TOXEN, Ecotoxicology of Aquatic Microorganisms Laboratory, Université du Québec à Montréal, Montréal, Canada.ORCID http://orcid.org/0000-0002-7259-9636
Shouwen ChenState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, China. chenshouwen@mail.hzau.edu.cn.ORCID http://orcid.org/0000-0003-3503-4561
Qingyun YanEnvironmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, 510006, China. yanqy6@mail.sysu.edu.cn.ORCID http://orcid.org/0000-0003-0053-892X
Jizhong ZhouInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA. jzhou@ou.edu.ORCID http://orcid.org/0000-0003-2014-0564
Zhili HeEnvironmental Microbiomics Research Center, School of Environmental Science and Engineering, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, 510006, China. hezhili@mail.sysu.edu.cn.ORCID http://orcid.org/0000-0001-8225-7333
Sun Yat-sen University · CNUniversity of Oklahoma · USUniversity of Missouri · USGuangdong Academy of Sciences · CNHuazhong Agricultural University · CNHunan Agricultural University · CNLawrence Berkeley National Laboratory · USUniversité du Québec à Montréal · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elevated nitrate in the environment inhibits sulfate reduction by important microorganisms of sulfate-reducing bacteria (SRB). Several SRB may respire nitrate to survive under elevated nitrate, but how SRB that lack nitrate reductase survive to elevated nitrate remains elusive. To understand nitrate adaptation mechanisms, we evolved 12 populations of a model SRB (i.e., Desulfovibrio vulgaris Hildenborough, DvH) under elevated NaNO

Indexed as

DesulfovibrioDesulfovibrio vulgarisGenotypeNitratesNitrogen OxidesOxidation-ReductionSulfatesNitratesNitrogen OxidesSulfates

Identifiers

PMID32934357
PMCPMC7784701
OpenAlexW3087176413

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.