Evidence map›Paper›PMID 32934228›Full record

ArticleNature communications2020

Temperate infection in a virus-host system previously known for virulent dynamics.

Ben Knowles, Juan A Bonachela, Michael J Behrenfeld, Karen G Bondoc, B B Cael, Craig A Carlson, Nick Cieslik, Ben Diaz, Heidi L Fuchs, Jason R Graff and 13 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 53 citations in OpenAlex.

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  19. Towards an integrative view of virus phenotypes.Nature reviews. Microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 7 institutions in 4 countries.

Ben KnowlesDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA. benjaminwilliamknowles@gmail.com.ORCID http://orcid.org/0000-0002-0800-102X
Juan A BonachelaDepartment of Ecology, Evolution, and Natural Resources, Rutgers University, New Brunswick, NJ, 08901, USA.ORCID http://orcid.org/0000-0002-3316-8120
Michael J BehrenfeldDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.
Karen G BondocDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.ORCID http://orcid.org/0000-0002-4336-4133
B B CaelNational Oceanography Centre, SO14 3ZH, Southampton, UK.
Craig A CarlsonDepartment of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, 93106, USA.
Nick CieslikDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Ben DiazDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Heidi L FuchsDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.ORCID http://orcid.org/0000-0001-5017-2327
Jason R GraffDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.
Juris A GrasisSchool of Natural Sciences, University of California Merced, Merced, CA, 95343, USA.ORCID http://orcid.org/0000-0002-3945-0135
Kimberly H HalseyDepartment of Microbiology, Oregon State University, Corvallis, OR, 97331, USA.ORCID http://orcid.org/0000-0002-1407-0777
Liti HaramatyDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Christopher T JohnsDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Frank NataleDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Jozef I NissimovDepartment of Biology and the Waterloo Centre for Microbial Research, University of Waterloo, Waterloo, ON, N2L 3G1, Canada.
Brittany SchielerDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Kimberlee ThamatrakolnDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.ORCID http://orcid.org/0000-0002-8029-5026
T Frede ThingstadMarine Microbiology Research Group, Department of Biological Sciences, University of Bergen, 5020, Bergen, Norway.
Selina VågeMarine Microbiology Research Group, Department of Biological Sciences, University of Bergen, 5020, Bergen, Norway.
Cliff WatkinsDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA.
Toby K WestberryDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.ORCID http://orcid.org/0000-0003-3341-6080
Kay D BidleDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, 08901, USA. bidle@marine.rutgers.edu.ORCID http://orcid.org/0000-0003-4170-412X
Rutgers, The State University of New Jersey · USOregon State University · USUniversity of Bergen · NONational Oceanography Centre · GBUniversity of California, Merced · USUniversity of California, Santa Barbara · USUniversity of Waterloo · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The blooming cosmopolitan coccolithophore Emiliania huxleyi and its viruses (EhVs) are a model for density-dependent virulent dynamics. EhVs commonly exhibit rapid viral reproduction and drive host death in high-density laboratory cultures and mesocosms that simulate blooms. Here we show that this system exhibits physiology-dependent temperate dynamics at environmentally relevant E. huxleyi host densities rather than virulent dynamics, with viruses switching from a long-term non-lethal temperate phase in healthy hosts to a lethal lytic stage as host cells become physiologically stressed. Using this system as a model for temperate infection dynamics, we present a template to diagnose temperate infection in other virus-host systems by integrating experimental, theoretical, and environmental approaches. Finding temperate dynamics in such an established virulent host-virus model system indicates that temperateness may be more pervasive than previously considered, and that the role of viruses in bloom formation and decline may be governed by host physiology rather than by host-virus densities.

Indexed as

HaptophytaHost-Pathogen InteractionsModels, BiologicalPlant VirusesVirulence

Identifiers

PMID32934228
PMCPMC7493887
OpenAlexW3087366719

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.