Evidence map›Paper›PMID 32933480›Full record

ArticleBMC genetics2020

Molecular basis of a new ovine model for human 3M syndrome-2.

S A Woolley, S E Hayes, M R Shariflou, F W Nicholas, C E Willet, B A O'Rourke, I Tammen

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. A Splice Site Variant inAnimals : an open access journal from MDPI · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

S A WoolleyFaculty of Science, Sydney School of Veterinary Science, The University of Sydney, Camden, NSW, 2570, Australia.
S E HayesFaculty of Science, Sydney School of Veterinary Science, The University of Sydney, Camden, NSW, 2570, Australia.
M R ShariflouFaculty of Science, Sydney School of Veterinary Science, The University of Sydney, Camden, NSW, 2570, Australia.
F W NicholasFaculty of Science, Sydney School of Veterinary Science, The University of Sydney, Camden, NSW, 2570, Australia.
C E WilletSydney Informatics Hub, Core Research Facilities, The University of Sydney, Sydney, NSW, 2006, Australia.
B A O'RourkeNSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, NSW, 2568, Australia.
I TammenFaculty of Science, Sydney School of Veterinary Science, The University of Sydney, Camden, NSW, 2570, Australia. imke.tammen@sydney.edu.au.ORCID 0000-0002-5520-6597
The University of Sydney · AUNew South Wales Department of Primary Industries · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBrachygnathia, cardiomegaly and renal hypoplasia syndrome (BCRHS, OMIA 001595-9940 ) is a previously reported recessively inherited disorder in Australian Poll Merino/Merino sheep. Affected lambs are stillborn with various congenital defects as reflected in the name of the disease, as well as short stature, a short and broad cranium, a small thoracic cavity, thin ribs and brachysternum. The BCRHS phenotype shows similarity to certain human short stature syndromes, in particular the human 3M syndrome-2. Here we report the identification of a likely disease-causing variant and propose an ovine model for human 3M syndrome-2.

resultsEight positional candidate genes were identified among the 39 genes in the approximately 1 Mb interval to which the disease was mapped previously. Obscurin like cytoskeletal adaptor 1 (OBSL1) was selected as a strong positional candidate gene based on gene function and the resulting phenotypes observed in humans with mutations in this gene. Whole genome sequencing of an affected lamb (BCRHS3) identified a likely causal variant ENSOARG00000020239:g.220472248delC within OBSL1. Sanger sequencing of seven affected, six obligate carrier, two phenotypically unaffected animals from the original flock and one unrelated control animal validated the variant. A genotyping assay was developed to genotype 583 animals from the original flock, giving an estimated allele frequency of 5%.

conclusionsThe identification of a likely disease-causing variant resulting in a frameshift (p.(Val573Trpfs*119)) in the OBSL1 protein has enabled improved breeding management of the implicated flock. The opportunity for an ovine model for human 3M syndrome and ensuing therapeutic research is promising given the availability of carrier ram semen for BCRHS.

Indexed as

Disease Models, AnimalFrameshift MutationAmino Acid SequenceAnimalsAustraliaCytoskeletal ProteinsDNA Mutational AnalysisDwarfismFemaleGene FrequencyHumansMaleMuscle HypotoniaPedigreePhenotypePolymorphism, Single NucleotideCytoskeletal Proteins3M syndrome-2Animal modelFrameshift variantInherited diseaseLethalSheepWhole genome sequencing

Identifiers

PMID32933480
PMCPMC7493961
OpenAlexW3086250039

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.