Evidence map›Paper›PMID 32933142›Full record

ArticleMolecules (Basel, Switzerland)2020

In Vitro Selection of an ATP-Binding TNA Aptamer.

Li Zhang, John C Chaput

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Li ZhangDepartments of Pharmaceutical Sciences, University of California, Irvine, CA 92697-3958, USA.
John C ChaputDepartments of Pharmaceutical Sciences, University of California, Irvine, CA 92697-3958, USA.ORCID 0000-0003-1393-135X
University of California, Irvine · US

Funding

National Science Foundation 1946312
6 · The paper itself

Abstract

Recent advances in polymerase engineering have made it possible to isolate aptamers from libraries of synthetic genetic polymers (XNAs) with backbone structures that are distinct from those found in nature. However, nearly all of the XNA aptamers produced thus far have been generated against protein targets, raising significant questions about the ability of XNA aptamers to recognize small molecule targets. Here, we report the evolution of an ATP-binding aptamer composed entirely of α-L-threose nucleic acid (TNA). A chemically synthesized version of the best aptamer sequence shows high affinity to ATP and strong specificity against other naturally occurring ribonucleotide triphosphates. Unlike its DNA and RNA counterparts that are susceptible to nuclease digestion, the ATP-binding TNA aptamer exhibits high biological stability against hydrolytic enzymes that rapidly degrade DNA and RNA. Based on these findings, we suggest that TNA aptamers could find widespread use as molecular recognition elements in diagnostic and therapeutic applications that require high biological stability.

Indexed as

Adenosine TriphosphateAptamers, NucleotideBase SequenceGenetic EngineeringNucleic Acid ConformationOligonucleotidesRibonucleotidesSELEX Aptamer TechniqueSmall Molecule LibrariesSolid-Phase Synthesis TechniquesTetrosesAdenosine TriphosphateAptamers, NucleotideerythroseOligonucleotidesRibonucleotidesSmall Molecule LibrariesTetrosesaptamerbiological stabilityTNA

Identifiers

PMID32933142
PMCPMC7570665
OpenAlexW3086772101

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.