Evidence map›Paper›PMID 32933054›Full record

ArticleInternational journal of molecular sciences2020

Electrophile-Induced Conformational Switch of the Human TRPA1 Ion Channel Detected by Mass Spectrometry.

Lavanya Moparthi, Sven Kjellström, Per Kjellbom, Milos R Filipovic, Peter M Zygmunt, Urban Johanson

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Interactions between Chemesthesis and Taste: Role of TRPA1 and TRPV1.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Lavanya MoparthiWallenberg Centre for Molecular Medicine (WCMM), Linköping University, SE-581 85 Linköping, Sweden.ORCID 0000-0002-6030-3084
Sven KjellströmDivision of Mass Spectrometry, Department of Clinical Sciences, Lund University, SE-22184 Lund, Sweden.
Per KjellbomDivision of Biochemistry and Structural Biology, Center for Molecular Protein Science, Lund University, PO Box 124, SE-221 00 Lund, Sweden.
Milos R FilipovicDepartment of Chemistry and Pharmacy, Friedrich-Alexander University Erlangen-Nuremberg, Egerlandstrasse 1, 91058 Erlangen, Germany.
Peter M ZygmuntDepartment of Clinical Sciences Malmö, Lund University, SE-214 28 Malmö, Sweden.ORCID 0000-0002-5102-8199
Urban JohansonDivision of Biochemistry and Structural Biology, Center for Molecular Protein Science, Lund University, PO Box 124, SE-221 00 Lund, Sweden.ORCID 0000-0001-8862-128X
Lund University · SELinköping University · SEUniversité de Bordeaux · FR

Funding

FLÄK Research School, Lunds University xxxxLund University Medical Faculty Foundation ALFSKANE-451751Svenska Forskningsrådet Formas 2007-718Vetenskapsrådet 2014-3801; 2010-5787; 2007-6110
6 · The paper itself

Abstract

The human Transient Receptor Potential A1 (hTRPA1) ion channel, also known as the wasabi receptor, acts as a biosensor of various potentially harmful stimuli. It is activated by a wide range of chemicals, including the electrophilic compound N-methylmaleimide (NMM), but the mechanism of activation is not fully understood. Here, we used mass spectrometry to map and quantify the covalent labeling in hTRPA1 at three different concentrations of NMM. A functional truncated version of hTRPA1 (Δ1-688 hTRPA1), lacking the large N-terminal ankyrin repeat domain (ARD), was also assessed in the same way. In the full length hTRPA1, the labeling of different cysteines ranged from nil up to 95% already at the lowest concentration of NMM, suggesting large differences in reactivity of the thiols. Most important, the labeling of some cysteine residues increased while others decreased with the concentration of NMM, both in the full length and the truncated protein. These findings indicate a conformational switch of the proteins, possibly associated with activation or desensitization of the ion channel. In addition, several lysines in the transmembrane domain and the proximal N-terminal region were labeled by NMM, raising the possibility that lysines are also key targets for electrophilic activation of hTRPA1.

Indexed as

Ankyrin RepeatCysteineHumansIon Channel GatingLysineMass SpectrometryProtein DomainsSulfhydryl CompoundsTRPA1 Cation ChannelCysteineLysineSulfhydryl CompoundsTRPA1 Cation ChannelTRPA1 protein, humanalkylated thiolselectrophile sensingIodoacetamidemass spectrometryN-methylmaleimidepainredox sensitivityTRPA1TRP channelwasabi receptor

Identifiers

PMID32933054
PMCPMC7555621
OpenAlexW3084451647

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.