Evidence map›Paper›PMID 32932695›Full record

ArticleMolecules (Basel, Switzerland)2020

Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples.

Christian Panse, Seema Sharma, Romain Huguet, Dennis Vughs, Jonas Grossmann, Andrea Mizzi Brunner

Abstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Christian PanseFunctional Genomics Center Zurich, University of Zurich/ETH Zurich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.ORCID 0000-0003-1975-3064
Seema SharmaThermo Fisher Scientific, San Jose, CA 95134, USA.
Romain HuguetThermo Fisher Scientific, San Jose, CA 95134, USA.
Dennis VughsKWR Water Research Institute, P.O. Box 1072, 3430 BB Nieuwegein, The Netherlands.
Jonas GrossmannFunctional Genomics Center Zurich, University of Zurich/ETH Zurich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.
Andrea Mizzi BrunnerKWR Water Research Institute, P.O. Box 1072, 3430 BB Nieuwegein, The Netherlands.ORCID 0000-0002-2801-1751

Funding

Joint Research Program of the Dutch and Belgian drinking water companies 402045/096
6 · The paper itself

Abstract

Non-target screening (NTS) based on the combination of liquid chromatography coupled to high-resolution mass spectrometry has become the key method to identify organic micro-pollutants (OMPs) in water samples. However, a large number of compounds remains unidentified with current NTS approaches due to poor quality fragmentation spectra generated by suboptimal fragmentation methods. Here, the potential of the alternative fragmentation technique ultraviolet photodissociation (UVPD) to improve identification of OMPs in water samples was investigated. A diverse set of water-relevant OMPs was selected based on k-means clustering and unsupervised artificial neural networks. The selected OMPs were analyzed using an Orbitrap Fusion Lumos equipped with UVPD. Therewith, information-rich MS2 fragmentation spectra of compounds that fragment poorly with higher-energy collisional dissociation (HCD) could be attained. Development of an R-based data analysis workflow and user interface facilitated the characterization and comparison of HCD and UVPD fragmentation patterns. UVPD and HCD generated both unique and common fragments, demonstrating that some fragmentation pathways are specific to the respective fragmentation method, while others seem more generic. Application of UVPD fragmentation to the analysis of surface water enabled OMP identification using existing HCD spectral libraries. However, high-throughput applications still require optimization of informatics workflows and spectral libraries tailored to UVPD.

Indexed as

Ultraviolet RaysCheminformaticsChromatography, LiquidCluster AnalysisData Interpretation, StatisticalEnvironmental MonitoringMass SpectrometryModels, StatisticalNeural Networks, ComputerOrganic ChemicalsPhotochemistryProgramming LanguagesReference StandardsSoftwareWaterWater Pollutants, ChemicalOrganic ChemicalsWaterWater Pollutants, Chemicalcheminformaticsdata analysishigher-energy collisional dissociationmass spectrometrynon-target screeningorganic micropollutantssmall molecule fragmentationultraviolet photodissociationwater quality

Identifiers

PMID32932695
PMCPMC7570901

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.