Evidence map›Paper›PMID 32932572›Full record

ArticlePlants (Basel, Switzerland)2020

Population Structure and Genetic Diversity in Korean Cowpea Germplasm Based on SNP Markers.

Eunju Seo, Kipoong Kim, Tae-Hwan Jun, Jinsil Choi, Seong-Hoon Kim, María Muñoz-Amatriaín, Hokeun Sun, Bo-Keun Ha

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Cowpea (Frontiers in plant science · 2025
    Review
  7. Article
  8. Article
  9. Genome-Wide Association Study on Cowpea seed coat color using RGB images.Molecular breeding : new strategies in plant improvement · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Population structure and genetic diversity inFrontiers in plant science · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Eunju SeoDepartment of Applied Plant Science, Chonnam National University, Gwangju 61186, Korea.
Kipoong KimDepartment of Statistics, Pusan National University, Busan 46241, Korea.
Tae-Hwan JunDepartment of Plant Bioscience, Pusan National University, Busan 46241, Korea.ORCID 0000-0002-8502-2238
Jinsil ChoiJeollanamdo Agricultural Research and Extension Services, Naju 58213, Korea.
Seong-Hoon KimNational Agrobiodiversity Center, National Institute of Agricultural Sciences, RDA, Jeonju 54874, Korea.
María Muñoz-AmatriaínDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523, USA.
Hokeun SunDepartment of Statistics, Pusan National University, Busan 46241, Korea.
Bo-Keun HaDepartment of Applied Plant Science, Chonnam National University, Gwangju 61186, Korea.ORCID 0000-0002-2295-365X
Pusan National University · KRChonnam National University · KRColorado State University · USJeonbuk Agricultural Research & Extension Services · KRNational Institute of Agricultural Science and Technology · KR

Funding

"Cooperative Research Program for Agriculture Science and Technology Development" Rural Development Administration, Republic of Korea. PJ013125032020
6 · The paper itself

Abstract

Cowpea is one of the most essential legume crops providing inexpensive dietary protein and nutrients. The aim of this study was to understand the genetic diversity and population structure of global and Korean cowpea germplasms. A total of 384 cowpea accessions from 21 countries were genotyped with the Cowpea iSelect Consortium Array containing 51,128 single-nucleotide polymorphisms (SNPs). After SNP filtering, a genetic diversity study was carried out using 35,116 SNPs within 376 cowpea accessions, including 229 Korean accessions. Based on structure and principal component analysis, a total of 376 global accessions were divided into four major populations. Accessions in group 1 were from Asia and Europe, those in groups 2 and 4 were from Korea, and those in group 3 were from West Africa. In addition, 229 Korean accessions were divided into three major populations (Q1, Jeonra province; Q2, Gangwon province; Q3, a mixture of provinces). Additionally, the neighbor-joining tree indicated similar results. Further genetic diversity analysis within the global and Korean population groups indicated low heterozygosity, a low polymorphism information content, and a high inbreeding coefficient in the Korean cowpea accessions. The population structure analysis will provide useful knowledge to support the genetic potential of the cowpea breeding program, especially in Korea.

Indexed as

cowpeagenetic diversitypopulation structuresingle-nucleotide polymorphism

Identifiers

PMID32932572
PMCPMC7569878
OpenAlexW3085861823

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.