Evidence map›Paper›PMID 32932244›Full record

ArticleJournal of neural engineering2020

Distinguishing false and true positive detections of high frequency oscillations.

Stephen V Gliske, Zihan Qin, Katy Lau, Catalina Alvarado-Rojas, Pariya Salami, Rina Zelmann, William C Stacey

Abstract read
In one paragraph

Article in Journal of neural engineering, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Observational
  4. Optimizing automated detection of high frequency oscillations using visual markings does not improve SOZ localization.Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology · 2024
    Article
  5. Estimation of Circular Statistics in the Presence of Measurement Bias.IEEE journal of biomedical and health informatics · 2024
    Article
  6. Article
  7. EEG biomarker candidates for the identification of epilepsy.Clinical neurophysiology practice · 2023
    Review
  8. Article
  9. Elimination of pseudo-HFOs in iEEG using sparse representation and Random Forest classifier.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stephen V GliskeDepartment of Neurosurgery, University of Nebraska Medical Center, Omaha, Nebraska, United States of America.ORCID 0000-0002-2259-2612
Zihan QinDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan, United States of America.
Katy LauDepartment of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, Michigan, United States of America.
Catalina Alvarado-RojasDepartment of Electronic Engineering, Pontificia Universidad Javeriana, Bogotá, Colombia.
Pariya SalamiDepartment of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America.
Rina ZelmannDepartment of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America.ORCID 0000-0002-2142-7324
William C StaceyDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-8359-8057

Funding

Characterizing High Frequency Oscillations as an epilepsy biomarker with Big Data toolsR01NS094399 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI STACEY, WILLIAM CHARLES · 2015 to 2025
$4.1M
Epileptic biomarkers and big data: identifying brain regions to resect in patients with refractory epilepsyK01ES026839 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GLISKE, STEPHEN V · 2015 to 2019
$734k
Doris Duke Charitable Foundation 2015096NIEHS NIH HHS K01 ES026839NINDS NIH HHS R01 NS094399
6 · The paper itself

Abstract

objectiveHigh frequency oscillations (HFOs) are a promising biomarker of tissue that instigates seizures. However, ambiguous data and random background fluctuations can cause any HFO detector (human or automated) to falsely label non-HFO data as an HFO (a false positive detection). The objective of this paper was to identify quantitative features of HFOs that distinguish between true and false positive detections. APPROACH: Feature selection was performed using background data in multi-day, interictal intracranial recordings from ten patients. We selected the feature most similar between randomly selected segments of background data and HFOs detected in surrogate background data (false positive detections by construction). We then compared these results with fuzzy clustering of detected HFOs in clinical data to verify the feature's applicability. We validated the feature is sensitive to false versus true positive HFO detections by using an independent data set (six subjects) scored for HFOs by three human reviewers. Lastly, we compared the effect of redacting putative false positive HFO detections on the distribution of HFOs across channels and their association with seizure onset zone (SOZ) and resected volume (RV). MAIN

resultsOf the 15 analyzed features, the analysis selected only skewness of the curvature (skewCurve). The feature was validated in human scored data to be associated with distinguishing true and false positive HFO detections. Automated HFO detections with higher skewCurve were more focal based on entropy measures and had increased localization to both the SOZ and RV. SIGNIFICANCE: We identified a quantitative feature of HFOs which helps distinguish between true and false positive detections. Redacting putative false positive HFO detections improves the specificity of HFOs as a biomarker of epileptic tissue.

Indexed as

ElectroencephalographyEpilepsyCluster AnalysisEntropyHumansSeizures

Identifiers

PMID32932244
PMCPMC8547344

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.