Evidence map›Paper›PMID 32931631›Full record

ArticleTransboundary and emerging diseases2021

Temporal dynamics and the influence of environmental variables on the prevalence of avian influenza virus in main wetlands in central Chile.

Soledad Ruiz, Pedro Jimenez-Bluhm, Francisca Di Pillo, Cecilia Baumberger, Pablo Galdames, Victor Marambio, Carla Salazar, Cristian Mattar, Juan Sanhueza, Stacey Schultz-Cherry and 1 more

Open access · greenAbstract read
In one paragraph

Article in Transboundary and emerging diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Soledad RuizDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.ORCID https://orcid.org/0000-0002-9475-9629
Pedro Jimenez-BluhmDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.ORCID https://orcid.org/0000-0002-6474-0804
Francisca Di PilloNúcleo de Investigaciones Aplicadas en Ciencias Veterinarias y Agronómicas, Facultad de Medicina Veterinaria y Agronomía, Universidad de Las Américas, Santiago, Chile.ORCID https://orcid.org/0000-0001-6662-0323
Cecilia BaumbergerDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.ORCID https://orcid.org/0000-0003-1489-129X
Pablo GaldamesDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.
Victor MarambioDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.
Carla SalazarDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.
Cristian MattarLaboratory for Analysis of the Biosphere (LAB), University of Chile, Santiago, Chile.ORCID https://orcid.org/0000-0002-9941-2309
Juan SanhuezaDepartamento de Ciencias Veterinarias y Salud Pública, Facultad de Recursos Naturales, Universidad Católica de Temuco, Temuco, Chile.ORCID https://orcid.org/0000-0003-4320-3839
Stacey Schultz-CherryDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID https://orcid.org/0000-0002-2021-727X
Christopher Hamilton-WestDepartment of Preventive Veterinary Medicine, Faculty of Veterinary Science, Universidad de Chile, Santiago, Chile.ORCID https://orcid.org/0000-0002-5609-2237
Universidad de Santiago de Chile · CLSt. Jude Children's Research Hospital · USUniversidad Católica de Temuco · CLUniversity of Chile · CLUniversity of the Americas · CL

Funding

Fondo Nacional de Desarrollo Científico y Tecnológico 1191747NIAID NIH HHS HHSN272201400006C
6 · The paper itself

Abstract

Although wild birds are considered the main reservoir of the influenza A virus (IAV) in nature, empirical investigations exploring the interaction between the IAV prevalence in these populations and environmental drivers remain scarce. Chile has a coastline of more than 4000 kilometres with hundreds of wetlands, which are important habitats for both resident and inter-hemispheric migratory species. The aim of this study was to characterize the temporal dynamics of IAV in main wetlands in central Chile and to assess the influence of environmental variables on AIV prevalence. For that purpose, four wetlands were studied from September 2015 to June 2018. Fresh faecal samples of wild birds were collected for IAV detection by real-time RT-PCR. Furthermore, a count of wild birds present at the site was performed and environmental variables, such as temperature, rainfall, vegetation coverage (Normalized Difference Vegetation Index (NDVI)) and water body size, were determined. A generalized linear mixed model was built to assess the association between IAV prevalence and explanatory variables. An overall prevalence of 4.28% ± 0.28% was detected with important fluctuations among seasons, being greater during summer (OR = 4.87, 95% CI 2.11 to 11.21) and fall (OR = 2.59, 95% CI 1.12 to 5.97). Prevalence was positively associated with minimum temperature for the month of sampling and negatively associated with water body size measured two months before sampling, and NDVI measured three months before sampling. These results contribute to the understanding of IAV ecological drivers in Chilean wetlands providing important considerations for the global surveillance of IAV.

Indexed as

AnimalsBirdsChileEnvironmentInfluenza A virusInfluenza in BirdsPrevalenceTime FactorsWetlandsChilegeneralized linear mixed modelinfluenza virusNDVIwild birds

Identifiers

PMID32931631
PMCPMC7956909
OpenAlexW3087109060

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.