Evidence map›Paper›PMID 32931148›Full record

ArticleMolecular genetics & genomic medicine2020

Characterization of CRB1 splicing in retinal organoids derived from a patient with adult-onset rod-cone dystrophy caused by the c.1892A>G and c.2548G>A variants.

Xiao Zhang, Jennifer A Thompson, Dan Zhang, Jason Charng, Sukanya Arunachalam, Terri L McLaren, Tina M Lamey, John N De Roach, Luke Jennings, Samuel McLenachan and 1 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Novel Genotype-Phenotype Correlations inOphthalmology science · 2026
    Article
  3. USH2A-Mutated Human Retinal Organoids Model Rod-Cone Dystrophy.Investigative ophthalmology & visual science · 2025
    Article
  4. Review
  5. Article
  6. Review
  7. Diverse functions and pathogenetic role of Crumbs in retinopathy.Cell communication and signaling : CCS · 2024
    Review
  8. Article
  9. Retinal organoids as models for development and diseases.Cell regeneration (London, England) · 2021
    Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Xiao ZhangCentre for Ophthalmology and Visual Science, The University of Western Australia, Nedlands, WA, Australia.
Jennifer A ThompsonAustralian Inherited Retinal Disease Registry and DNA Bank, Sir Charles Gairdner Hospital, Nedlands, WA, Australia.ORCID 0000-0003-3553-6457
Dan ZhangLions Eye Institute, Nedlands, WA, Australia.
Jason CharngLions Eye Institute, Nedlands, WA, Australia.
Sukanya ArunachalamLions Eye Institute, Nedlands, WA, Australia.
Terri L McLarenCentre for Ophthalmology and Visual Science, The University of Western Australia, Nedlands, WA, Australia.
Tina M LameyCentre for Ophthalmology and Visual Science, The University of Western Australia, Nedlands, WA, Australia.
John N De RoachCentre for Ophthalmology and Visual Science, The University of Western Australia, Nedlands, WA, Australia.
Luke JenningsLions Eye Institute, Nedlands, WA, Australia.
Samuel McLenachanCentre for Ophthalmology and Visual Science, The University of Western Australia, Nedlands, WA, Australia.ORCID 0000-0001-5732-7387
Fred K ChenCentre for Ophthalmology and Visual Science, The University of Western Australia, Nedlands, WA, Australia.ORCID 0000-0003-2809-9930
Lions Eye Institute · AUSir Charles Gairdner Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMutations in the human crumbs homologue 1 (CRB1) gene are associated with a spectrum of inherited retinal diseases. However, functional studies demonstrating the impact of individual CRB1 mutations on gene expression are lacking for most variants. Here, we investigated the effect of two CRB1 variants on pre-mRNA splicing using neural retinal organoids (NRO) derived from a patient with recessive rod-cone dystrophy caused by compound heterozygous mutations in CRB1 (c.1892A>G and c.2548G>A).

methodsThe patient received ophthalmological examinations including multimodal imaging. NRO were differentiated from induced pluripotent stem cells (iPSCs) derived from the patient and a control subject. CRB1 transcripts were characterized by RT-PCR and Sanger sequencing.

resultsThe Patient displayed retinal thickening with disorganization of retinal layers and preservation of para-arteriolar retinal pigment epithelium. Both patient and control iPSC produced NRO containing photoreceptor progenitor cells expressing CRB1 mRNA. Patient NRO expressed a novel CRB1 transcript displaying skipping of exon 6. CRB1 transcripts containing the c.2548G>A substitution in exon 7 were expressed in patient NRO.

conclusionsTogether, these results confirm the pathogenicity of the c.1892A>G and c.2548G>A CRB1 variants in a family with recessive adult-onset rod-cone dystrophy and further demonstrate the effects of these variants on pre-mRNA splicing. This data provide important insights into the pathogenic mechanisms associated with these variants.

Indexed as

MutationRNA SplicingCells, CulturedCone-Rod DystrophiesEye ProteinsFemaleHumansInduced Pluripotent Stem CellsMembrane ProteinsMiddle AgedNerve Tissue ProteinsOrganoidsRetinaCRB1 protein, humanEye ProteinsMembrane ProteinsNerve Tissue Proteins

Identifiers

PMID32931148
PMCPMC7667350
OpenAlexW3087736494

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.