Evidence map›Paper›PMID 32929630›Full record

ArticleProtoplasma2021

MiR396 regulatory network and its expression during grain development in wheat.

Yi Yu, Fangyao Sun, Ning Chen, Genlou Sun, Cheng-Yu Wang, De-Xiang Wu

Abstract read
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In one paragraph

Article in Protoplasma, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. PeerJ · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Multiple Functions of MiRNAs inLife (Basel, Switzerland) · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yi YuCollege of Agronomy, Anhui Agricultural University, Hefei, 230036, Anhui, China.
Fangyao SunCollege of Agronomy, Anhui Agricultural University, Hefei, 230036, Anhui, China.
Ning ChenBiology Department, Saint Mary's University, Halifax, NS, B3H 3C3, Canada.
Genlou SunBiology Department, Saint Mary's University, Halifax, NS, B3H 3C3, Canada. genlou.sun@smu.ca.ORCID http://orcid.org/0000-0001-9144-6072
Cheng-Yu WangCollege of Agronomy, Anhui Agricultural University, Hefei, 230036, Anhui, China. wangchengyu@ahau.edu.cn.
De-Xiang WuCollege of Agronomy, Anhui Agricultural University, Hefei, 230036, Anhui, China. dexiangwu198@ahau.edu.cn.

Funding

international Science and Technology Cooperation Projects of Anhui Province 1704e1002232National Key Research and Development Program of China 2017YFD0301304Research Foundation for Talented Scholars from Anhui Agricultural University and the introduced leading talent research team for Universities in Anhui Province N/A
6 · The paper itself

Abstract

Wheat contains the largest number of miR396 family with 17 miR396 in Poaceae. MiR396 regulatory network underlying wheat grain development has not comprehensively been explored. Our results showed that precursor miR396 family in Poaceae exhibited not only conservativeness but also diversification especially in wheat. Five haplotypes were detected in Poaceae species, while 4 haplotypes in wheat with Hap-4 (miR396a) and Hap-5 (miR396n) unique to wheat. GO enrichment analysis of target genes showed that the first 20 enrichment functions of miR396a and miR396n are completely different from each other, and also completely different from miR396(b-g), miR396(h-m), and miR396(o-q). Functional annotation on the 18 target genes shared by miR396(b-g), miR396(h-m), and miR396(o-q) found that 11 of the 18 target genes are growth-regulating factor (GRF) genes. Our results indicated that, during the grain filling stage of wheat, miR396 is involved in the development of grains by regulating the expression of GRF genes (GRF1, GRF6, and GRF9). Although the enrichment function of miR396(b-g), miR396(h-m), and miR396(o-q) is the same, the gene functional networks they formed differ greatly. Our results indicated that polyploidization enriches not only the diversity of miR396 family and its target genes but also gene functional networks in wheat. These results laid foundation for further elucidating function of miR396 gene family underlying wheat grain development.

Indexed as

Edible GrainGene Regulatory NetworksMicroRNAsTriticumMicroRNAsMIRN396 microRNA, ArabidopsisDiversificationmiRNAPoaceaeTarget geneWheat

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.