Evidence map›Paper›PMID 32929238›Full record

ArticleNature ecology & evolution2020

Ecology shapes epistasis in a genotype-phenotype-fitness map for stick insect colour.

Patrik Nosil, Romain Villoutreix, Clarissa F de Carvalho, Jeffrey L Feder, Thomas L Parchman, Zach Gompert

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature ecology & evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. The Ecology of Hybrid Incompatibilities.Cold Spring Harbor perspectives in biology · 2024
    Review
  3. Whole-Genome Resequencing-Based Qualitative Trait Locus Mapping CorrelatedAnimals : an open access journal from MDPI · 2024
    Article
  4. Complex evolutionary processes maintain an ancient chromosomal inversion.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Article
  6. Shell color polymorphism in marine gastropods.Evolutionary applications · 2023
    Review
  7. Article
  8. Article
  9. Testing for fitness epistasis in a transplant experiment identifies a candidate adaptive locus inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  10. A method to predict the response to directional selection using a Kalman filter.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Patrik NosilCentre d'Ecologie Fonctionelle et Evolutive, Centre National de la Recherche Scientifique, Montpellier, France. patrik.nosil@cefe.cnrs.fr.ORCID http://orcid.org/0000-0002-8271-9005
Romain VilloutreixCentre d'Ecologie Fonctionelle et Evolutive, Centre National de la Recherche Scientifique, Montpellier, France.ORCID http://orcid.org/0000-0002-1815-3844
Clarissa F de CarvalhoCentre d'Ecologie Fonctionelle et Evolutive, Centre National de la Recherche Scientifique, Montpellier, France.ORCID http://orcid.org/0000-0002-5780-5454
Jeffrey L FederDepartment of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA.ORCID http://orcid.org/0000-0002-8797-980X
Thomas L ParchmanDepartment of Biology, University of Nevada Reno, Reno, NV, USA.ORCID http://orcid.org/0000-0003-1771-1514
Zach GompertDepartment of Biology, Utah State University, Logan, UT, USA.
Centre National de la Recherche Scientifique · FRUtah State University · USUniversity of Nevada, Reno · USUniversity of Notre Dame · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic interactions such as epistasis are widespread in nature and can shape evolutionary dynamics. Epistasis occurs due to nonlinearity in biological systems, which can arise via cellular processes that convert genotype to phenotype and via selective processes that connect phenotype to fitness. Few studies in nature have connected genotype to phenotype to fitness for multiple potentially interacting genetic variants. Thus, the causes of epistasis in the wild remain poorly understood. Here, we show that epistasis for fitness is an emergent and predictable property of nonlinear selective processes. We do so by measuring the genetic basis of cryptic colouration and survival in a field experiment with stick insects. We find that colouration shows a largely additive genetic basis but with some effects of epistasis that enhance differentiation between colour morphs. In terms of fitness, different combinations of loci affecting colouration confer high survival in one host-plant treatment. Specifically, nonlinear correlational selection for specific combinations of colour traits in this treatment drives the emergence of pairwise and higher-order epistasis for fitness at loci underlying colour. In turn, this results in a rugged fitness landscape for genotypes. In contrast, fitness epistasis was dampened in another treatment, where selection was weaker. Patterns of epistasis that are shaped by ecologically based selection could be common and central to understanding fitness landscapes, the dynamics of evolution and potentially other complex systems.

Indexed as

Epistasis, GeneticInsectaAnimalsColorGenotypeMutationPhenotype

Identifiers

PMID32929238
OpenAlexW3086862203

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.