Evidence map›Paper›PMID 32929017›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in

Alejandra Freire-Rios, Keita Tanaka, Isidro Crespo, Elmar van der Wijk, Yana Sizentsova, Victor Levitsky, Simon Lindhoud, Mattia Fontana, Johannes Hohlbein, D Roeland Boer and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 115 citations in OpenAlex.

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  13. Mechanisms of auxin action in plant growth and development.Nature reviews. Molecular cell biology · 2025
    Review
  14. Review
  15. Article
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  17. A conserved ARF-DNA interface underlies auxin-triggered transcriptional response.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Alejandra Freire-RiosLaboratory of Biochemistry, Wageningen University, 6708 WE Wageningen, The Netherlands.ORCID 0000-0001-7076-0716
Keita TanakaLaboratory of Biochemistry, Wageningen University, 6708 WE Wageningen, The Netherlands.ORCID 0000-0002-5551-5525
Isidro CrespoAlba Synchrotron, Cerdanyola del Vallès, 08290 Barcelona, Spain.ORCID 0000-0001-7698-1720
Elmar van der WijkLaboratory of Biochemistry, Wageningen University, 6708 WE Wageningen, The Netherlands.ORCID 0000-0003-4426-0691
Yana SizentsovaInstitute of Cytology and Genetics, 630090 Novosibirsk, Russian Federation.
Victor LevitskyInstitute of Cytology and Genetics, 630090 Novosibirsk, Russian Federation.ORCID 0000-0002-4905-3088
Simon LindhoudLaboratory of Biochemistry, Wageningen University, 6708 WE Wageningen, The Netherlands.
Mattia FontanaLaboratory of Biochemistry, Wageningen University, 6708 WE Wageningen, The Netherlands.
Johannes HohlbeinLaboratory of Biophysics, Wageningen University, 6708 WE Wageningen, The Netherlands.ORCID 0000-0001-7436-2221
D Roeland BoerAlba Synchrotron, Cerdanyola del Vallès, 08290 Barcelona, Spain.ORCID 0000-0001-5949-6627
Victoria MironovaInstitute of Cytology and Genetics, 630090 Novosibirsk, Russian Federation; victoria.v.mironova@gmail.com dolf.weijers@wur.nl.ORCID 0000-0003-3438-0147
Dolf WeijersLaboratory of Biochemistry, Wageningen University, 6708 WE Wageningen, The Netherlands; victoria.v.mironova@gmail.com dolf.weijers@wur.nl.ORCID 0000-0003-4378-141X
Wageningen University & Research · NLALBA Synchrotron (Spain) · ESNovosibirsk State University · RUInstitute of Cytology and Genetics · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hormone auxin controls many aspects of the plant life cycle by regulating the expression of thousands of genes. The transcriptional output of the nuclear auxin signaling pathway is determined by the activity of AUXIN RESPONSE transcription FACTORs (ARFs), through their binding to

Indexed as

Gene Expression Regulation, PlantResponse ElementsArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsGenome-Wide Association StudyIndoleacetic AcidsInverted Repeat SequencesMultigene FamilyRepetitive Sequences, Nucleic AcidTranscription FactorsArabidopsis ProteinsARF1 protein, ArabidopsisBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsIndoleacetic AcidsTARGET OF MP 5 protein, ArabidopsisTranscription FactorsARF transcription factorsauxinplant biologyprotein–DNA interactiontranscriptional regulation

Identifiers

PMID32929017
PMCPMC7533888
OpenAlexW3087203224

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.