Evidence map›Paper›PMID 32927802›Full record

ArticleInternational journal of molecular sciences2020

Colon Transcriptomics Reveals Sex-Dependent Metabolic Signatures in Response to 2-Amino-1-methyl-6-phenylimidazo[4,5-b]pyridine Treatment in C57BL/6N Mice.

Jeong Hoon Pan, Cara Cicalo, Brandy Le, Suwon Jeon, Sangyub Kim, Kyung A Hwang, Byungwhi Kong, Jin Hyup Lee, Jae Kyeom Kim

Open access · goldAbstract readValidation Study
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 8 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Jeong Hoon PanDepartment of Behavioral Health and Nutrition, College of Health Sciences, University of Delaware, Newark, DE 19716, USA.ORCID 0000-0002-0264-8391
Cara CicaloDepartment of Behavioral Health and Nutrition, College of Health Sciences, University of Delaware, Newark, DE 19716, USA.
Brandy LeDepartment of Behavioral Health and Nutrition, College of Health Sciences, University of Delaware, Newark, DE 19716, USA.
Suwon JeonDepartment of Behavioral Health and Nutrition, College of Health Sciences, University of Delaware, Newark, DE 19716, USA.
Sangyub KimDepartment of Pharmacology, Penn State College of Medicine, Penn State University, Hershey, PA 17033, USA.
Kyung A HwangDepartment of Agrofood Resources, National Institute of Agricultural Sciences, Rural Development Administration, Jeollabuk-do 55365, Korea.
Byungwhi KongDepartment of Poultry Science, Dale Bumpers College of Agricultural, Food and Life Sciences, University of Arkansas, Fayetteville, AR 72701, USA.ORCID 0000-0002-8082-176X
Jin Hyup LeeDepartment of Food and Biotechnology, College of Science & Technology, Korea University, Sejong 30019, Korea.ORCID 0000-0002-6437-5157
Jae Kyeom KimDepartment of Behavioral Health and Nutrition, College of Health Sciences, University of Delaware, Newark, DE 19716, USA.
University of Delaware · USDale Bumpers Small Farms Research Center · USDepartment of Behavioral Health · USKorea University · KRPennsylvania State University · USRural Development Administration · KR

Funding

China Scholarship Council 201706910013National Research Foundation of Korea NRF-2019R1A2C1090007University of Arkansas VPRED Start-upUniversity of Delaware BHAN175183
6 · The paper itself

Abstract

Diets high in red meats, particularly meats cooked at high temperature, increase the risk of colon cancer due to a production of heterocyclic aromatic amines (HAAs). Of the identified HAAs, 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) is the most mass abundant colon carcinogen in charred meat or fish. Here, we comprehensively examined sex-dependent colon transcriptome signatures in response to PhIP treatment to identify biological discrepancies. Eight-week-old male and female C57BL/6N mice were intraperitoneally injected with PhIP (10 mg/kg of body weight) and colon tissues were harvested 24 h after PhIP injection, followed by colon transcriptomics analysis. A list of differentially expressed genes (DEGs) was utilized for computational bioinformatic analyses. Specifically, overrepresentation test using the Protein Analysis Through Evolutionary Relationships tool was carried out to annotate sex-dependent changes in transcriptome signatures after PhIP treatment. Additionally, the most significantly affected canonical pathways by PhIP treatment were predicted using the Ingenuity Pathway Analysis. As results, male and female mice presented different metabolic signatures in the colon transcriptome. In the male mice, oxidative phosphorylation in the mitochondrial respiratory chain was the pathway impacted the most; this might be due to a shortage of ATP for DNA repair. On the other hand, the female mice showed concurrent activation of lipolysis and adipogenesis. The present study provides the foundational information for future studies of PhIP effects on underlying sex-dependent mechanisms.

Indexed as

AminopyridinesImidazolesSex CharacteristicsTranscriptomeAnimalsColonColorectal NeoplasmsFemaleMaleMice, Inbred C57BL2-amino-1-methyl-6-phenyl-1H-imidazo(4,5-b)pyridineAminopyridinesImidazolescolonic transcriptomelipolysismitochondrial dysfunctionPhIP metabolismsex-based difference

Identifiers

PMID32927802
PMCPMC7555907
OpenAlexW3083843358

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.