Evidence map›Paper›PMID 32920097›Full record

ArticleMathematical biosciences2020

Modeling tau transport in the axon initial segment.

Ivan A Kuznetsov, Andrey V Kuznetsov

Open access · greenAbstract read
In one paragraph

Article in Mathematical biosciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Cellular and pathological functions of tau.Nature reviews. Molecular cell biology · 2024
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Ivan A KuznetsovPerelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA.
Andrey V KuznetsovDepartment of Mechanical and Aerospace Engineering, North Carolina State University, Raleigh, NC 27695-7910, USA. Electronic address: avkuznet@ncsu.edu.
North Carolina State University · USUniversity of Pennsylvania · US

Funding

Computationally Driven Design of De Novo Genetically Encoded Voltage IndicatorsF30MH122076 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI KUZNETSOV, IVAN · 2020 to 2023
$151k
National Science Foundation CBET-1642262NIMH NIH HHS F30 MH122076NIMH NIH HHS F30 MH122076-01
6 · The paper itself

Abstract

By assuming that tau protein can be in seven kinetic states, we developed a model of tau protein transport in the axon and in the axon initial segment (AIS). Two separate sets of kinetic constants were determined, one in the axon and the other in the AIS. This was done by fitting the model predictions in the axon with experimental results and by fitting the model predictions in the AIS with the assumed linear increase of the total tau concentration in the AIS. The calibrated model was used to make predictions about tau transport in the axon and in the AIS. To the best of our knowledge, this is the first paper that presents a mathematical model of tau transport in the AIS. Our modeling results suggest that binding of free tau to microtubules creates a negative gradient of free tau in the AIS. This leads to diffusion-driven tau transport from the soma into the AIS. The model further suggests that slow axonal transport and diffusion-driven transport of tau work together in the AIS, moving tau anterogradely. Our numerical results predict an interplay between these two mechanisms: as the distance from the soma increases, the diffusion-driven transport decreases, while motor-driven transport becomes larger. Thus, the machinery in the AIS works as a pump, moving tau into the axon.

Indexed as

Models, NeurologicalAlzheimer DiseaseAnimalsAxonal TransportAxon Initial SegmentAxonsBiological Transport, ActiveComputer SimulationDiffusionHumansKineticsMathematical ConceptsMicrotubulestau ProteinsMAPT protein, humantau ProteinsAlzheimer’s diseaseAxonMathematical modelingNeuronTau diffusion barrier

Identifiers

PMID32920097
PMCPMC8550824
OpenAlexW3040600598

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.