Evidence map›Paper›PMID 32918096›Full record

ArticleArchives of microbiology2021

Visualization and characterization of Enterococcus faecalis biofilm structure in bovine dentin using 2D and 3D microscopic techniques.

Ali Keleş, Cangül Keskin, Melis Kalkan, Yusuf Yakupoğulları, Mehmet Gül, Hikmet Aydemir, Fikrettin Şahin

Abstract read
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In one paragraph

Article in Archives of microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ali KeleşDepartment of Endodontics, Faculty of Dentistry, Ondokuz Mayıs University Samsun, Samsun, Turkey.
Cangül KeskinDepartment of Endodontics, Faculty of Dentistry, Ondokuz Mayıs University Samsun, Samsun, Turkey. cangul.keskin@gmail.com.ORCID http://orcid.org/0000-0001-8990-4847
Melis KalkanDepartment of Genetic and Bioengineering, Faculty of Engineering and Architecture, Yeditepe University, Istanbul, Turkey.
Yusuf YakupoğullarıDepartment of Medical Microbiology, Faculty of Medicine, İnönü University, Malatya, Turkey.
Mehmet GülDepartment of Histology and Embryology, Faculty of Medicine, İnönü University, Malatya, Turkey.
Hikmet AydemirDepartment of Endodontics, Faculty of Dentistry, Ondokuz Mayıs University Samsun, Samsun, Turkey.
Fikrettin ŞahinDepartment of Genetic and Bioengineering, Faculty of Engineering and Architecture, Yeditepe University, Istanbul, Turkey.
Ondokuz Mayıs University · TRInonu University · TRYeditepe University · TR

Funding

Türkiye Bilimsel ve Teknolojik Araştirma Kurumu (TR) 114S511
6 · The paper itself

Abstract

Bacterial biofilms are related to various dental and periodontal infectious diseases, and the characterization of this biological structure with micro-computed tomography (micro-CT) may offer valuable information for clinical and research applications. In this study, we aimed to develop a model to visualize three-dimensionally the biofilm structure on dentin using micro-CT. Dentin blocks were prepared and incubated in tryptic soy broth with Enterococcus faecalis (ATCC 29212). The control group did not receive any staining procedure, while groups 1 and 2 were stained with 100% and 50% barium sulfate, respectively. Transmission electron microscopy (TEM) and confocal laser scanning microscopy (CLSM) were used to detect biofilm formation, barium sulfate penetration, and microbial cell density in the biofilm. Micro-computed tomography (micro-CT) (SkyScan 1172, Bruker Co., Belgium) was used to visualize biofilm formation on the dentin blocks. Biofilm thicknesses were measured from 10 different locations on the specimen surfaces, using CTAn v.1.14.4 software. Obtained data were statistically analyzed using Kruskal-Wallis and Dunn's tests. TEM photomicrographs showed that barium sulfate could penetrate the biofilm structure. CLSM analysis showed that viable and total cell densities were similar between the control and barium sulfate-treated groups (P > 0.05), indicating barium sulfate had no significant influence on cell density. In barium sulfate-treated blocks, biofilm could be discriminated from the dentin, and its thickness could be measured with micro-CT. This study showed that bacterial biofilm on dentin could be characterized by micro-CT after barium sulfate staining without causing any significant side effect on viable and total cell densities.

Indexed as

BiofilmsAnimalsCattleDentinEnterococcus faecalisMicroscopy, ConfocalMicroscopy, Electron, TransmissionX-Ray MicrotomographyBiofilmDentinMicro-computed tomographyTransmission electron microscopy

Identifiers

PMID32918096
OpenAlexW3084797768

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.