Evidence map›Paper›PMID 32917832›Full record

ArticleRMD open2020

Association of ERAP2 polymorphisms in Colombian HLA-B27+ or HLA-B15+ patients with SpA and its relationship with clinical presentation: axial or peripheral predominance.

John Londono, Ana M Santos, Juan C Rueda, Enrique Calvo-Paramo, Ruben Burgos-Vargas, Gilberto Vargas-Alarcon, Nancy Martinez-Rodriguez, Sofia Arias-Correal, Guisselle-Nathalia Muñoz, Diana Padilla and 7 more

Open access · goldAbstract read
In one paragraph

Article in RMD open, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 3 countries.

John LondonoDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia john.londono@unisabana.edu.co.ORCID 0000-0003-1074-644X
Ana M SantosDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Juan C RuedaDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Enrique Calvo-ParamoDepartment of Radiology, Universidad Nacional de Colombia, Bogota, Colombia.
Ruben Burgos-VargasServicio de Reumatologia, Hospital General de Mexico, Mexico, Mexico.
Gilberto Vargas-AlarconDepartment of Molecular Biology, Instituto Nacional de Cardiologia Ignacio Chavez, Mexico, Mexico.
Nancy Martinez-RodriguezCommunity Health Research Department, Hospital Infantil de Mexico Federico Gomez, Mexico City, Mexico.
Sofia Arias-CorrealDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Guisselle-Nathalia MuñozDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Diana PadillaDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Francy CuervoDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Viviana Reyes-MartinezDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Santiago Bernal-MacíasDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.ORCID 0000-0002-7010-8338
Catalina Villota-ErasoDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Luz M Avila-PortilloDepartment of Rheumatology, Universidad de la Sabana, Chia, Colombia.
Consuelo RomeroDepartment of Rheumatology, Hospital Militar Central, Bogota, Colombia.
Juan F MedinaClinical Training Unit, School of Medicine, Universidad de Navarra, Pamplona, Spain.
Universidad de La Sabana · COHospital General de México · MXHospital Infantil de México Federico Gómez · MXHospital Militar Central · COInstituto Nacional de Cardiología · MXUniversidad de Navarra · ESUniversidad Nacional de Colombia · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo determine the association between endoplasmic reticulum aminopeptidase (ERAP)1 and ERAP2 single-nucleotide polymorphisms (SNPs) and human leukocyte antigens (HLA)-B27+ or HLA-B15+ patients with spondyloarthritis (SpA).

methods104 patients with SpA according to Assessment of Spondyloarthritis International Society criteria were included in the study. HLA typing was performed by PCR. The polymorphisms were determined by real-time PCR on genomic DNA using customised probes for SNPs rs27044, rs17482078, rs10050860 and rs30187 in

results70 of the104 patients with SpA were HLA-B27+ and 34 were HLA-B15+. The distribution of ERAP1 and ERAP2 SNPs between the HLA-B15+ and HLA-B27+ patients with SpA did not reveal differences. Likewise, no differences in the frequencies of ERAP1 SNP haplotypes and alleles HLA-B15 or HLA-B27 were found. Interestingly, however, the frequencies of three particular haplotypes formed by ERAP2 SNPs rs2549782/rs2248374/rs2910686 varied between HLA-B15+ and HLA-B27+ patients: the ERAP2 SNPs haplotype TGT was more common in HLA-B15+ patients with SpA (OR 2.943, 95% CI 1.264 to 6.585; P=0.009), whereas the ERAP2 SNP haplotypes TGC and CAT were more associated with HLA-B27+ patients with SpA: (OR 4.483, 95% CI 1.524 to 13.187; p=0.003) and (OR 9.014, 95% CI 1.181 to 68.807; p=0.009), respectively.

conclusionAn association was found between HLA-B15+ patients with SpA and haplotype TGT of ERAP2 SNPs. On the other hand, HLA-B27+ patients with SpA were associated with ERAP2 haplotypes TGC and CAT. These associations could be related to the clinical presentation of the disease, specifically with a peripheral or axial predominance, respectively.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdultAllelesAminopeptidasesAutoimmunityBiomarkersColombiaCytokinesFemaleGenetic Association StudiesGenotypeHistocompatibility TestingHLA-B15 AntigenHLA-B27 AntigenHumansAminopeptidasesBiomarkersCytokinesERAP2 protein, humanHLA-B15 AntigenHLA-B27 AntigenInflammation MediatorsAnkylosing SpondylitisAutoimmune DiseasesGene PolymorphismSpondyloarthritis

Identifiers

PMID32917832
PMCPMC7525252
OpenAlexW3084562883

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.