Evidence map›Paper›PMID 32917631›Full record

ArticleScience advances2020

CDK13 cooperates with CDK12 to control global RNA polymerase II processivity.

Zheng Fan, Jennifer R Devlin, Simon J Hogg, Maria A Doyle, Paul F Harrison, Izabela Todorovski, Leonie A Cluse, Deborah A Knight, Jarrod J Sandow, Gareth Gregory and 11 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 163 citations in OpenAlex.

  1. Review
  2. Review
  3. Targeting CDKs in the RNAPII transcription cycle.Nature reviews. Drug discovery · 2026
    Review
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  18. CDK12 and CDK13 in oncology: from RNA regulation to therapeutic targeting.Cellular oncology (Dordrecht, Netherlands) · 2026
    Review
  19. Review
  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 4 countries.

Zheng FanThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0003-1934-2521
Jennifer R DevlinThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0002-2933-6240
Simon J HoggThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0002-3170-839X
Maria A DoyleThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.
Paul F HarrisonMonash Biomedicine Discovery Institute, Monash University, Clayton, 3800 VIC, Australia.ORCID 0000-0002-3980-268X
Izabela TodorovskiThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.
Leonie A CluseThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0001-8613-0508
Deborah A KnightThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0003-4778-7966
Jarrod J SandowWalter and Eliza Hall Institute of Medical Research, Parkville, 3052 VIC, Australia.
Gareth GregoryThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0002-4170-0682
Andrew FoxThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia.ORCID 0000-0002-0574-0978
Traude H BeilharzMonash Biomedicine Discovery Institute, Monash University, Clayton, 3800 VIC, Australia.
Nicholas KwiatkowskiDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0002-2092-4185
Nichollas E ScottDepartment of Microbiology and Immunology, Peter Doherty Institute, University of Melbourne, Parkville, 3052 VIC, Australia.ORCID 0000-0003-2556-8316
Ana Tufegdzic VidakovicMechanisms of Transcription Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Gavin P KellyBioinformatics and Biostatistics, The Francis Crick Institute, London NW1 1AT, UK.ORCID 0000-0001-7219-560X
Jesper Q SvejstrupMechanisms of Transcription Laboratory, The Francis Crick Institute, London NW1 1AT, UK.ORCID 0000-0003-4964-6147
Matthias GeyerInstitute of Structural Biology, University of Bonn, Sigmund-Freud-Strasse 25, 53127 Bonn, Germany.ORCID 0000-0002-7718-5002
Nathanael S GrayDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0001-5354-7403
Stephin J VervoortThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia. ricky.johnstone@petermac.org stephin.vervoort@petermac.org.ORCID 0000-0001-7459-126X
Ricky W JohnstoneThe Peter MacCallum Cancer Centre, Melbourne, 3000 VIC, Australia. ricky.johnstone@petermac.org stephin.vervoort@petermac.org.ORCID 0000-0001-7053-9237
The University of Melbourne · AUPeter MacCallum Cancer Centre · AUThe Francis Crick Institute · GBDiscovery Institute · USHarvard University · USPeter Doherty Institute · AUUniversity of Bonn · DE

Funding

Cancer Research UK 11567Wellcome Trust FC001166
6 · The paper itself

Abstract

The RNA polymerase II (POLII)-driven transcription cycle is tightly regulated at distinct checkpoints by cyclin-dependent kinases (CDKs) and their cognate cyclins. The molecular events underpinning transcriptional elongation, processivity, and the CDK-cyclin pair(s) involved remain poorly understood. Using CRISPR-Cas9 homology-directed repair, we generated analog-sensitive kinase variants of CDK12 and CDK13 to probe their individual and shared biological and molecular roles. Single inhibition of CDK12 or CDK13 induced transcriptional responses associated with cellular growth signaling pathways and/or DNA damage, with minimal effects on cell viability. In contrast, dual kinase inhibition potently induced cell death, which was associated with extensive genome-wide transcriptional changes including widespread use of alternative 3' polyadenylation sites. At the molecular level, dual kinase inhibition resulted in the loss of POLII CTD phosphorylation and greatly reduced POLII elongation rates and processivity. These data define substantial redundancy between CDK12 and CDK13 and identify both as fundamental regulators of global POLII processivity and transcription elongation.

Identifiers

PMID32917631
PMCPMC7190357
OpenAlexW3021695369

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.