Evidence map›Paper›PMID 32917005›Full record

ArticleInternational journal of molecular sciences2020

A Multi-Endpoint Approach to Base Excision Repair Incision Activity Augmented by PARylation and DNA Damage Levels in Mice: Impact of Sex and Age.

Nicola Winkelbeiner, Viktoria K Wandt, Franziska Ebert, Kristina Lossow, Ezgi E Bankoglu, Maximilian Martin, Aswin Mangerich, Helga Stopper, Julia Bornhorst, Anna P Kipp and 1 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Nicola WinkelbeinerDepartment of Food Chemistry, Institute of Nutritional Science, University of Potsdam, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany.ORCID 0000-0003-3455-7774
Viktoria K WandtDepartment of Food Chemistry, Institute of Nutritional Science, University of Potsdam, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany.ORCID 0000-0002-6163-589X
Franziska EbertDepartment of Food Chemistry, Institute of Nutritional Science, University of Potsdam, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany.ORCID 0000-0001-7358-9264
Kristina LossowTraceAge-DFG Research Unit on Interactions of Essential Trace Elements in Healthy and Diseased Elderly (FOR 2558), 14558 Berlin-Potsdam-Jena-Wuppertal, Germany.ORCID 0000-0002-9978-3871
Ezgi E BankogluInstitute of Pharmacology and Toxicology, University of Würzburg, Versbacher Straße 9, 97078 Würzburg, Germany.
Maximilian MartinDepartment of Food Chemistry, Institute of Nutritional Science, University of Potsdam, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany.
Aswin MangerichDepartment of Biology, Molecular Toxicology Group, University of Konstanz, Universitätsstraße 10, 78457 Konstanz, Germany.ORCID 0000-0001-9742-2338
Helga StopperInstitute of Pharmacology and Toxicology, University of Würzburg, Versbacher Straße 9, 97078 Würzburg, Germany.ORCID 0000-0003-4168-8211
Julia BornhorstTraceAge-DFG Research Unit on Interactions of Essential Trace Elements in Healthy and Diseased Elderly (FOR 2558), 14558 Berlin-Potsdam-Jena-Wuppertal, Germany.
Anna P KippTraceAge-DFG Research Unit on Interactions of Essential Trace Elements in Healthy and Diseased Elderly (FOR 2558), 14558 Berlin-Potsdam-Jena-Wuppertal, Germany.ORCID 0000-0002-3307-1038
Tanja SchwerdtleDepartment of Food Chemistry, Institute of Nutritional Science, University of Potsdam, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany.
University of Potsdam · DEUniversity of Würzburg · DEFriedrich Schiller University Jena · DEGerman Institute of Human Nutrition · DEUniversity of Konstanz · DEUniversity of Wuppertal · DE

Funding

Deutsche Forschungsgemeinschaft FOR 2558, SCHW 903/16-1
6 · The paper itself

Abstract

Investigation of processes that contribute to the maintenance of genomic stability is one crucial factor in the attempt to understand mechanisms that facilitate ageing. The DNA damage response (DDR) and DNA repair mechanisms are crucial to safeguard the integrity of DNA and to prevent accumulation of persistent DNA damage. Among them, base excision repair (BER) plays a decisive role. BER is the major repair pathway for small oxidative base modifications and apurinic/apyrimidinic (AP) sites. We established a highly sensitive non-radioactive assay to measure BER incision activity in murine liver samples. Incision activity can be assessed towards the three DNA lesions 8-oxo-2'-deoxyguanosine (8-oxodG), 5-hydroxy-2'-deoxyuracil (5-OHdU), and an AP site analogue. We applied the established assay to murine livers of adult and old mice of both sexes. Furthermore, poly(ADP-ribosyl)ation (PARylation) was assessed, which is an important determinant in DDR and BER. Additionally, DNA damage levels were measured to examine the overall damage levels. No impact of ageing on the investigated endpoints in liver tissue were found. However, animal sex seems to be a significant impact factor, as evident by sex-dependent alterations in all endpoints investigated. Moreover, our results revealed interrelationships between the investigated endpoints indicative for the synergetic mode of action of the cellular DNA integrity maintaining machinery.

Indexed as

DNA DamageDNA RepairPoly ADP RibosylationAgingAnimalsDenaturing Gradient Gel ElectrophoresisFemaleHep G2 CellsHumansLiverMaleMice, Inbred C57BLOligonucleotidesSex CharacteristicsOligonucleotidesageingbase excision repair (incision activity)DNA damageDNA damage responselivermaintenance of genomic integritypoly(ADP-ribosyl)ationsex

Identifiers

PMID32917005
PMCPMC7555950
OpenAlexW3083982368

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.