Evidence map›Paper›PMID 32916549›Full record

ArticleRedox biology2020

A clickable probe for versatile characterization of S-nitrosothiols.

Jenna L Clements, Franziska Pohl, Pandi Muthupandi, Stephen C Rogers, Jack Mao, Allan Doctor, Vladimir B Birman, Jason M Held

Open access · goldAbstract read
In one paragraph

Article in Redox biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jenna L ClementsDepartment of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA.
Franziska PohlDepartment of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA.
Pandi MuthupandiDepartment of Chemistry, Washington University in Saint Louis, St. Louis, MO, 63110, USA.
Stephen C RogersDepartment of Pediatrics and Center for Blood Oxygen Transport and Hemostasis, University of Maryland, School of Medicine, Baltimore, MD, 21201, USA.
Jack MaoDepartment of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA.
Allan DoctorDepartment of Pediatrics and Center for Blood Oxygen Transport and Hemostasis, University of Maryland, School of Medicine, Baltimore, MD, 21201, USA.
Vladimir B BirmanDepartment of Chemistry, Washington University in Saint Louis, St. Louis, MO, 63110, USA.
Jason M HeldDepartment of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA; Siteman Cancer Center, Washington University Medical School, St. Louis, MO, 63110, USA; Department of Anesthesiology, Washington University Medical School, St. Louis, MO, 63110, USA. Electronic address: jheld@wustl.edu.
Washington University in St. Louis · USUniversity of Maryland, Baltimore · US

Funding

SEPSIS-INDUCED RED CELL DYSFUNCTION (SIRD)R01GM113838 · NIGMS · WASHINGTON UNIVERSITY · PI DOCTOR, ALLAN, MARSHALL, GARLAND ROSS · 2015 to 2019
$4.0M
NIGMS NIH HHS R01 GM113838
6 · The paper itself

Abstract

S-nitrosation of cysteine thiols (SNOs), commonly referred to as S-nitrosylation, is a cysteine oxoform that plays an important role in cellular signaling and impacts protein function and stability. Direct labeling of SNOs in cells with the flexibility to perform a wide range of cellular and biochemical assays remains a bottleneck as all SNO-targeted probes to date employ a single analytical modality such as biotin or a specific fluorophore. We therefore developed a clickable, alkyne-containing SNO probe 'PBZyn' based on the o-phosphino-benzoyl group warhead that enables multi-modal analysis via click conjugation. We demonstrate the utility of PBZyn to assay SNOs using in situ cellular imaging, protein blotting and affinity purification, as well as mass spectrometry. The flexible PBZyn probe will greatly facilitate investigation into the regulation of SNOs.

Indexed as

S-NitrosothiolsCysteineMass SpectrometryNitric OxideNitrosationProteinsCysteineNitric OxideProteinsS-NitrosothiolsClick chemistryPhosphineProbes-nitrosations-nitrosothiols-nitrosylationSNO

Identifiers

PMID32916549
PMCPMC7490559
OpenAlexW3081617062

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.