Evidence map›Paper›PMID 32913973›Full record

ArticleJCO precision oncology2017

Comprehensive Molecular Characterization of Urachal Adenocarcinoma Reveals Commonalities With Colorectal Cancer, Including a Hypermutable Phenotype.

Jordan Kardos, Sara E Wobker, Michael E Woods, Matthew E Nielsen, Angela B Smith, Eric M Wallen, Raj S Pruthi, Michele C Hayward, Katrina A McGinty, Juneko E Grilley-Olson and 7 more

Open access · greenAbstract read
In one paragraph

Article in JCO precision oncology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 48 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  17. Prevalence of APC and PTEN Alterations in Urachal Cancer.Pathology oncology research : POR · 2020
    Article
  18. Comparative genomic profiling of glandular bladder tumours.Virchows Archiv : an international journal of pathology · 2020
    Article
  19. Genomic Subtyping in Bladder Cancer.Current urology reports · 2020
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Jordan Kardos, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Sara E Wobker, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Michael E Woods, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Matthew E Nielsen, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Angela B Smith, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Eric M Wallen, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Raj S Pruthi, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Michele C Hayward, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Katrina A McGinty, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Juneko E Grilley-Olson, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Nirali M Patel, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Karen E Weck, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Peter Black, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Joel S Parker, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Matthew I Milowsky, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
D Neil Hayes, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
William Y Kim, , , , , , , , , , , , , , , and , University of North Carolina at Chapel Hill, Chapel Hill, NC; and , University of British Columbia, Vancouver, British Columbia, Canada.
Smiths Detection (Canada) · CA

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI David Darr · 1985 to 2026
$201.5M
Network Group Integrated Translational Science Centers ApplicationU10CA181009 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HAYES, DAVID N, PEROU, CHARLES M · 2014 to 2018
$3.4M
Kinase Inhibition in Kidney CancerR01CA202053 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KIM, WILLIAM Y. · 2016 to 2020
$2.1M
(PQD5) Predicting Anti-Cancer Efficacy through Tumor ProfilingR01CA185353 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KIM, WILLIAM Y. · 2014 to 2017
$1.6M
NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA185353NCI NIH HHS R01 CA202053NCI NIH HHS U10 CA181009
6 · The paper itself

Abstract

purposeUrachal adenocarcinoma is a rare type of primary bladder adenocarcinoma that comprises less than 1% of all bladder cancers. The low incidence of urachal adenocarcinomas does not allow for an evidence-based approach to therapy. Transcriptome profiling of urachal adenocarcinomas has not been previously reported. We hypothesized that an in-depth molecular understanding of urachal adenocarcinoma would uncover rational therapeutic strategies. PATIENTS AND

methodsWe performed targeted exon sequencing and global transcriptome profiling of 12 urachal tumors to generate a comprehensive molecular portrait of urachal adenocarcinoma. A single patient with an

resultsUrachal adenocarcinoma closely resembles colorectal cancer at the level of RNA expression, which extends previous observations that urachal tumors harbor genomic alterations that are found in colorectal adenocarcinoma. A subset of tumors was found to have alterations in genes that are associated with microsatellite instability (

conclusionBecause clinical trials are next to impossible for patients with rare tumors, precision oncology may be an important adjunct for treatment decisions. Our findings demonstrate that urachal adenocarcinomas molecularly resemble colorectal adenocarcinomas at the level of RNA expression, are the first report, to our knowledge, of

Identifiers

PMID32913973
PMCPMC7446420
OpenAlexW2728001194

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.