Evidence map›Paper›PMID 32913582›Full record

ArticleComputational and structural biotechnology journal2020

Structural and functional properties of Antarctic fish cytoglobins-1: Cold-reactivity in multi-ligand reactions.

Daniela Giordano, Alessandra Pesce, Stijn Vermeylen, Stefania Abbruzzetti, Marco Nardini, Francesco Marchesani, Herald Berghmans, Constantí Seira, Stefano Bruno, F Javier Luque and 6 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Daniela GiordanoInstitute of Biosciences and BioResources (IBBR), CNR, Via Pietro Castellino 111 80131 Napoli, Italy.
Alessandra PesceDepartment of Physics, University of Genova, Via Dodecaneso 33, I-16121 Genova, Italy.
Stijn VermeylenDepartment of Biomedical Sciences, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk, Belgium.
Stefania AbbruzzettiDepartment of Mathematical, Physical and Computer Sciences, University of Parma, Parco Area delle Scienze 7A, 43124 Parma, Italy.
Marco NardiniDepartment of Biosciences, University of Milano, Via Celoria 26, I-20133 Milano, Italy.
Francesco MarchesaniDepartment of Food and Drug, University of Parma, Parco Area delle Scienze 23A, 43124, Parma, Italy.
Herald BerghmansDepartment of Biomedical Sciences, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk, Belgium.
Constantí SeiraDepartment of Nutrition, Food Science and Gastronomy, Faculty of Pharmacy and Food Science, Institute of Biomedicine (IBUB) and Institute of Theoretical and Computational Chemistry (IQTCUB), University of Barcelona, Av. Prat de la Riba 171, Santa Coloma de Gramenet E-08921, Spain.
Stefano BrunoDepartment of Food and Drug, University of Parma, Parco Area delle Scienze 23A, 43124, Parma, Italy.
F Javier LuqueDepartment of Nutrition, Food Science and Gastronomy, Faculty of Pharmacy and Food Science, Institute of Biomedicine (IBUB) and Institute of Theoretical and Computational Chemistry (IQTCUB), University of Barcelona, Av. Prat de la Riba 171, Santa Coloma de Gramenet E-08921, Spain.
Guido di PriscoInstitute of Biosciences and BioResources (IBBR), CNR, Via Pietro Castellino 111 80131 Napoli, Italy.
Paolo AscenziInterdepartmental Laboratory for Electron Microscopy, Roma Tre University, Via della Vasca Navale 79, I-00146 Roma, Italy.
Sylvia DewildeDepartment of Biomedical Sciences, University of Antwerp, Universiteitsplein 1, B-2610 Wilrijk, Belgium.
Martino BolognesiDepartment of Biosciences, University of Milano, Via Celoria 26, I-20133 Milano, Italy.
Cristiano ViappianiDepartment of Mathematical, Physical and Computer Sciences, University of Parma, Parco Area delle Scienze 7A, 43124 Parma, Italy.
Cinzia VerdeInstitute of Biosciences and BioResources (IBBR), CNR, Via Pietro Castellino 111 80131 Napoli, Italy.
University of Parma · ITUniversity of Antwerp · BEStazione Zoologica Anton Dohrn · ITUniversitat de Barcelona · ESUniversity of Milan · ITInstitute of Biosciences and Bioresources · ITRoma Tre University · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While the functions of the recently discovered cytoglobin, ubiquitously expressed in vertebrate tissues, remain uncertain, Antarctic fish provide unparalleled models to study novel protein traits that may arise from cold adaptation. We report here the spectral, ligand-binding and enzymatic properties (peroxynitrite isomerization, nitrite-reductase activity) of cytoglobin-1 from two Antarctic fish,

Indexed as

C.aceCygb-1, Cytoglobin-1 of C. aceratusC.aceCygb-1*, Mutant of C.aceCygb-1CO, Carbon monoxideCold-adaptationCygb-1, Cytoglobin 1Cygb-2, Cytoglobin 2Cygb, CytoglobinCygbh, Hexa-coordinated bis-histidyl speciesCYGB, Human CygbCygbp, Penta-coordinated CygbCytoglobinD.mawCygb-1, Cytoglobin-1 of D. mawsoniD.mawCygb-1*, Mutant of D.mawCygb-1DTT, DithiothreitolHb, HemoglobinLigand propertiesMb, MyoglobinMD, Molecular DynamicsNGB, Human neuroglobinNO dioxygenaseNO, Nitric oxidep50, O2 partial pressure required to achieve half saturationrms, Root-mean squareRNS, Reactive Nitrogen SpeciesROS, Reactive Oxygen SpeciesX-ray structure

Identifiers

PMID32913582
PMCPMC7451756
OpenAlexW3048862967

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.