Evidence map›Paper›PMID 32909271›Full record

ArticleJournal of clinical laboratory analysis2021

Mutation analysis of TCOF1 gene in Chinese Treacher Collins syndrome patients.

Chuan Zhang, Lisha An, Huiqin Xue, Shengju Hao, Yousheng Yan, Qinghua Zhang, Xiaohua Jin, Qian Li, Bingbo Zhou, Xuan Feng and 6 more

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
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  5. [Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Chuan ZhangGraduate School of Peking, Union Medical College, Beijing, China.ORCID https://orcid.org/0000-0002-4403-4830
Lisha AnNational Research Institute for Family Planning, National Human Genetic Resources Center, Beijing, China.
Huiqin XueChildren's Hospital of Shanxi, Women Health Center of Shanxi, Affiliated Hospital of Shanxi Medical University, Taiyuan, China.
Shengju HaoGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Yousheng YanNational Research Institute for Family Planning, National Human Genetic Resources Center, Beijing, China.
Qinghua ZhangGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Xiaohua JinGraduate School of Peking, Union Medical College, Beijing, China.
Qian LiNational Research Institute for Family Planning, National Human Genetic Resources Center, Beijing, China.
Bingbo ZhouGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Xuan FengGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Panpan MaGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Xing WangGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Xue ChenGansu Province Medical Genetics Center, Gansu Province Maternal and Child Health Care Hospital, Lanzhou, China.
Cuixia ChenNational Research Institute for Family Planning, National Human Genetic Resources Center, Beijing, China.
Zongfu CaoGraduate School of Peking, Union Medical College, Beijing, China.
Xu MaGraduate School of Peking, Union Medical College, Beijing, China.
Gansu Provincial Maternal and Child Health Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNGenetic Resources Center · JPShanxi Medical University · CN

Funding

Gansu Natural Science Foundation 1606RJZA151Gansu Natural Science Foundation 1606RJZA159Gansu Natural Science Foundation 18JR3RA036National Population and Reproductive Health Science Data Center 2005DKA32408Non-profit Central Research Institute Fund of National Research Institute For Family Planing 2019GJZ07The National Key Research and Development Program of China 2016YFC1000307
6 · The paper itself

Abstract

backgroundTreacher Collins syndrome (TCS) is a rare autosomal dominant or recessive disorder, that involves unique bilateral craniofacial malformations. The phenotypes of TCS are extremely diverse. Interventional surgery can improve hearing loss and facial deformity in TCS patients.

methodWe recruited seven TCS families. Variant screening in probands was performed by targeted next-generation sequencing (NGS). The variants identified were confirmed by Sanger sequencing. The pathogenicity of all the mutations was evaluated using the guidelines of the American College of Medical Genetics and Genomics (ACMG) and InterVar software.

resultsThree frameshift variants, two nonsense variants, one missense variant, and one splicing variant of TCOF1 were identified in the seven TCS probands. Five variants including c.1393C > T, c.4111 + 5G>C, c.1142delC, c.2285_2286delCT, and c.1719delG had not been previously reported. Furthermore, we report the c.149A > G variant for the first time in a Chinese TCS patient. We provided prenatal diagnosis for family 4. Proband 7 chose interventional surgery.

conclusionWe identified five novel variants in TCOF1 in Chinese patients with TCS, which expands the mutation spectrum of TCOF1 in TCS. Bone conduction hearing rehabilitation can improve hearing for TCS patients and prenatal diagnosis can provide fertility guidance for TCS families.

Indexed as

ChinaDNA Mutational AnalysisEarFaceFemaleHearing Loss, ConductiveHigh-Throughput Nucleotide SequencingHumansInfantInfant, NewbornMaleMandibulofacial DysostosisMutationNuclear ProteinsPhosphoproteinsNuclear ProteinsPhosphoproteinsTCOF1 protein, humannext-generation sequencingSanger sequencingTCOF1Treacher Collins syndrome

Identifiers

PMID32909271
PMCPMC7843273
OpenAlexW3085385718

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.