Evidence map›Paper›PMID 32908882›Full record

ArticleBioMed research international2020

SCALEUS-FD: A FAIR Data Tool for Biomedical Applications.

Arnaldo Pereira, Rui Pedro Lopes, José Luís Oliveira

Abstract read
In one paragraph

Article in BioMed research international, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Arnaldo PereiraDETI/IEETA, University of Aveiro, Aveiro, Portugal.ORCID https://orcid.org/0000-0003-3361-6269
Rui Pedro LopesCeDRI, Polytechnic Institute of Bragança, Bragança, Portugal.ORCID https://orcid.org/0000-0002-9170-5078
José Luís OliveiraDETI/IEETA, University of Aveiro, Aveiro, Portugal.ORCID https://orcid.org/0000-0002-6672-6176

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Semantic Web and Linked Data concepts and technologies have empowered the scientific community with solutions to take full advantage of the increasingly available distributed and heterogeneous data in distinct silos. Additionally, FAIR Data principles established guidelines for data to be Findable, Accessible, Interoperable, and Reusable, and they are gaining traction in data stewardship. However, to explore their full potential, we must be able to transform legacy solutions smoothly into the FAIR Data ecosystem. In this paper, we introduce SCALEUS-FD, a FAIR Data extension of a legacy semantic web tool successfully used for data integration and semantic annotation and enrichment. The core functionalities of the solution follow the Semantic Web and Linked Data principles, offering a FAIR REST API for machine-to-machine operations. We applied a set of metrics to evaluate its "FAIRness" and created an application scenario in the rare diseases domain.

Indexed as

Semantic WebSoftwareBig DataBiological OntologiesBiological Science DisciplinesComputational BiologyDatabases, FactualHumansInternetMetadataSemantics

Identifiers

PMID32908882
PMCPMC7471816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.