Evidence map›Paper›PMID 32908216›Full record

ArticleCommunications biology2020

Allosteric regulation of lysosomal enzyme recognition by the cation-independent mannose 6-phosphate receptor.

Linda J Olson, Sandeep K Misra, Mayumi Ishihara, Kevin P Battaile, Oliver C Grant, Amika Sood, Robert J Woods, Jung-Ja P Kim, Michael Tiemeyer, Gang Ren and 2 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 34 citations in OpenAlex.

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  15. Structures of the mannose-6-phosphate pathway enzyme, GlcNAc-1-phosphotransferase.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Linda J OlsonDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. lolson@mcw.edu.ORCID http://orcid.org/0000-0001-5910-7281
Sandeep K MisraDepartment of BioMolecular Sciences, University of Mississippi, Oxford, MS, 38677, USA.ORCID http://orcid.org/0000-0001-9165-3987
Mayumi IshiharaComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Kevin P BattaileIMCA-CAT, Hauptman-Woodward Medical Research Institute, Argonne, IL, USA.ORCID http://orcid.org/0000-0003-0833-3259
Oliver C GrantComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.ORCID http://orcid.org/0000-0003-4835-5161
Amika SoodComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Robert J WoodsComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Jung-Ja P KimDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.ORCID http://orcid.org/0000-0001-5085-4299
Michael TiemeyerComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Gang RenThe Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.ORCID http://orcid.org/0000-0002-8036-2321
Joshua S SharpDepartment of BioMolecular Sciences, University of Mississippi, Oxford, MS, 38677, USA.
Nancy M DahmsDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. ndahms@mcw.edu.
University of Georgia · USMedical College of Wisconsin · USUniversity of Mississippi · USHauptman-Woodward Medical Research Institute · USLawrence Berkeley National Laboratory · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
Time resolved SAXS studies on the RP2/Arl3 complex pp.484-485P41GM103622 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2012 to 2020
$11.9M
STRUCTURAL ANALYSIS OF THE MANNOSE 6-PHOSPHATE RECEPTORSR01DK042667 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI DAHMS, NANCY M. · 1997 to 2023
$9.8M
Structure-Function Relationship Studies of the Plasma Lipid Transfer Proteins CETP and PLTPR01HL115153 · NHLBI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI REN, GANG · 2012 to 2021
$3.9M
Molecular Structure Determination by Mass Spectrometry and Computational ModelingR01GM127267 · NIGMS · UNIVERSITY OF MISSISSIPPI · PI Joshua S Sharp · 2018 to 2026
$3.8M
Tools to enable non-specialists to model glycoconjugates and glycan-protein interactionsU01CA207824 · NCI · UNIVERSITY OF GEORGIA · PI FOLEY, B. LACHELE, WOODS, ROBERT J · 2016 to 2018
$1.7M
NCI NIH HHS U01 CA207824NHLBI NIH HHS R01 HL115153NIDDK NIH HHS R01 DK042667NIDDK NIH HHS R01DK042667NIGMS NIH HHS P41 GM103390NIGMS NIH HHS P41 GM103622NIGMS NIH HHS R01 GM127267
6 · The paper itself

Abstract

The cation-independent mannose 6-phosphate receptor (CI-MPR, IGF2 receptor or CD222), is a multifunctional glycoprotein required for normal development. Through the receptor's ability to bind unrelated extracellular and intracellular ligands, it participates in numerous functions including protein trafficking, lysosomal biogenesis, and regulation of cell growth. Clinically, endogenous CI-MPR delivers infused recombinant enzymes to lysosomes in the treatment of lysosomal storage diseases. Although four of the 15 domains comprising CI-MPR's extracellular region bind phosphorylated glycans on lysosomal enzymes, knowledge of how CI-MPR interacts with ~60 different lysosomal enzymes is limited. Here, we show by electron microscopy and hydroxyl radical protein footprinting that the N-terminal region of CI-MPR undergoes dynamic conformational changes as a consequence of ligand binding and different pH conditions. These data, coupled with X-ray crystallography, surface plasmon resonance and molecular modeling, allow us to propose a model explaining how high-affinity carbohydrate binding is achieved through allosteric domain cooperativity.

Indexed as

Protein ConformationAllosteric RegulationBinding SitesCationsCrystallography, X-RayHumansHydroxyl RadicalLigandsLysosomal Storage DiseasesLysosomesMannoseMicroscopy, ElectronProtein FootprintingReceptor, IGF Type 2Surface Plasmon ResonanceCationsHydroxyl RadicalLigandsMannoseReceptor, IGF Type 2

Identifiers

PMID32908216
PMCPMC7481795
OpenAlexW3084279232

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.