Evidence map›Paper›PMID 32908082›Full record

ArticleThe Journal of reproduction and development2020

Comparative analysis of cell-free DNA content in culture medium and mitochondrial DNA copy number in porcine parthenogenetically activated embryos.

Mitsuru Kobayashi, Jun Ito, Koumei Shirasuna, Takehito Kuwayama, Hisataka Iwata

Open access · goldAbstract readComparative Study
In one paragraph

Article in The Journal of reproduction and development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mitsuru KobayashiDepartment of Animal Science, Tokyo University of Agriculture, Kanagawa 243-0034, Japan.
Jun ItoDepartment of Animal Science, Tokyo University of Agriculture, Kanagawa 243-0034, Japan.
Koumei ShirasunaDepartment of Animal Science, Tokyo University of Agriculture, Kanagawa 243-0034, Japan.
Takehito KuwayamaDepartment of Animal Science, Tokyo University of Agriculture, Kanagawa 243-0034, Japan.
Hisataka IwataDepartment of Animal Science, Tokyo University of Agriculture, Kanagawa 243-0034, Japan.
Tokyo University of Agriculture · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We examined the effect of ploidy on mitochondrial DNA (mtDNA) copy number in embryos and the amount of cell-free mitochondrial and nucleic DNA content (cf-mtDNA and cf-nDNA) in spent culture medium (SCM). Oocytes collected from the ovaries were matured, activated, incubated in medium containing cycloheximide (CHX) or CHX and cytochalasin B (CB) for 4.5 h to produce haploid or diploid embryos (H-group and D-group embryos). These embryos were cultured for 7 days, and the blastocysts and SCM were examined. The amount of mtDNA and nDNA was determined by real-time PCR. The rate of development to the blastocyst stage was higher for the D-group than for the H-group. Moreover, D-group blastocysts had less mtDNA compared to the H-group blastocysts. After activation, the mitochondrial content was constant before the blastocyst stage in D-group embryos, but increased earlier in H-group embryos. The amount of cf-mtDNA in the SCM of D-group blastocysts was greater than that of H-group blastocysts. However, when the cf-mtDNA in the SCM of 2 cell-stage embryos (day 2 post-activation) was examined, the amount of cf-mtDNA was greater in the H-group than in the D-group embryos. When D-group embryos were cultured for 7 days, a significant correlation was observed between the total cell number of blastocysts and cf-nDNA content in the SCM. Hence, although careful consideration is needed regarding the time point for evaluating mtDNA content in the embryos and SCM, this study demonstrates that mtDNA in the embryos and SCM was affected by the ploidy of the embryos.

Indexed as

Culture MediaParthenogenesisAnimalsBlastocystCell-Free Nucleic AcidsCycloheximideCytochalasin BDiploidyDNA Copy Number VariationsDNA, MitochondrialEmbryo Culture TechniquesEmbryonic DevelopmentKineticsMitochondriaOocytesPloidiesCell-Free Nucleic AcidsCulture MediaCycloheximideCytochalasin BDNA, MitochondrialReactive Oxygen SpeciesReceptors, Cell SurfaceBlastocystCell-free DNAMitochondrial numberPloidy

Identifiers

PMID32908082
PMCPMC7768170
OpenAlexW3084439731

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.