Evidence map›Paper›PMID 32906668›Full record

ArticleViruses2020

Identification of the Immediate-Early Genes of Cyprinid Herpesvirus 2.

Ruizhe Tang, Liqun Lu, Beiyang Wang, Jiao Yu, Hao Wang

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 36 citations in OpenAlex.

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    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ruizhe TangNational Pathogen Collection Center for Aquatic Animals, Shanghai Ocean University, Shanghai 201306, China.
Liqun LuNational Pathogen Collection Center for Aquatic Animals, Shanghai Ocean University, Shanghai 201306, China.
Beiyang WangChina Society of Fisheries, Beijing 100000, China.
Jiao YuChina Society of Fisheries, Beijing 100000, China.
Hao WangNational Pathogen Collection Center for Aquatic Animals, Shanghai Ocean University, Shanghai 201306, China.ORCID 0000-0002-8893-1568
Shanghai Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyprinid herpesvirus 2 (CyHV-2), which infects goldfish and crucian carp causing high mortality, is an emerging viral pathogen worldwide. The genome of CyHV-2 is large and comprises double-stranded DNA, including several genes similar to cyprinid herpesvirus 1, ictalurid herpesvirus-1, cyprinid herpesvirus 3, and ranid herpesvirus-1. Genes of DNA viruses are expressed in three temporal phases: immediate-early (IE), early (E), and late (L) genes. Viral IE genes initiate transcription as soon as the virus enters the host, without viral DNA replication. IE gene products enable the efficient expression of E and L genes or regulate the host to initiate virus replication. In the present study, five IE genes of CyHV-2 were identified, including open reading frame (ORF)54, ORF121, ORF141, ORF147, and ORF155. Time course analysis and reverse transcription polymerase chain reaction confirmed five IE genes, thirty-four E genes, and thirty-nine L genes. In addition, all 150 ORFs identified in the CyHV-2 genome are transcribed, and are expressed in chronological order, similar to other herpesviruses. This study is the first to identify the IE genes of CyHV-2, which will provide more information for viral molecular characterization.

Indexed as

AnimalsCarpsFish DiseasesGenes, Immediate-EarlyGenome, ViralGoldfishHerpesviridaeHerpesviridae InfectionsImmediate-Early ProteinsOpen Reading FramesPhylogenyImmediate-Early ProteinsCarassius auratus gibeliocyprinid herpesvirus 2immediate-early geneORF121

Identifiers

PMID32906668
PMCPMC7552009
OpenAlexW3083078619

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.