Evidence map›Paper›PMID 32904945›Full record

ArticleNeuro-oncology advances

Patient-derived cells from recurrent tumors that model the evolution of

Lindsey E Jones, Stephanie Hilz, Matthew R Grimmer, Tali Mazor, Chloé Najac, Joydeep Mukherjee, Andrew McKinney, Tracy Chow, Russell O Pieper, Sabrina M Ronen and 3 more

Open access · goldAbstract read
In one paragraph

Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

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  15. Zinc Finger MYND-Type Containing 8 (ZMYND8) Is Epigenetically Regulated in Mutant Isocitrate Dehydrogenase 1 (IDH1) Glioma to Promote Radioresistance.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
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  17. Deuterium Metabolic Imaging Reports on TERT Expression and Early Response to Therapy in Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Lindsey E JonesDepartment of Neurological Surgery, University of California, San Francisco, California, USA.ORCID 0000-0001-9603-7366
Stephanie HilzDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Matthew R GrimmerDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Tali MazorDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Chloé NajacDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Joydeep MukherjeeDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Andrew McKinneyDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Tracy ChowDepartment of Biochemistry and Biophysics, University of California, San Francisco, California, USA.
Russell O PieperDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Sabrina M RonenDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Susan M ChangDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Joanna J PhillipsDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
Joseph F CostelloDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
University of California, San Francisco · US

Funding

Tissue CoreP50CA097257 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph F Costello · 2002 to 2026
$57.4M
NRSA Training CoreTL1TR001871 · NCATS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KANAYA, ALKA M., SOMSOUK, MA · 2016 to 2025
$10.1M
Training Program in Translational Brain Tumor ResearchT32CA151022 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph F Costello · 2010 to 2026
$6.6M
PREDOCTORAL TRAINING IN BIOMEDICAL SCIENCEST32GM008568 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANSEL, KARL MARK · 1995 to 2019
$6.3M
Hypermutation and malignant progression in an expanded cohort of TMZ treated LGG patients from different molecular subgroupsF32CA206252 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRIMMER, MATTHEW R · 2016 to 2018
$139k
The 3D evolution and growth patterns of glioma cell populationsF32CA225054 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HILZ, STEPHANIE R · 2018 to 2018
$34k
NCATS NIH HHS TL1 TR001871NCI NIH HHS F32 CA206252NCI NIH HHS F32 CA225054NCI NIH HHS P50 CA097257NCI NIH HHS T32 CA151022NIGMS NIH HHS T32 GM008568
6 · The paper itself

Abstract

background

methodsWe derived and validated cell cultures from

resultsThe integrated astrocytoma phylogeny revealed 2 independent founder clonal expansions of hypermutated (HM) cells in tumor tissue that are faithfully represented by independent PDCs. The oligodendroglioma phylogeny showed more than 4000 temozolomide-associated mutations shared among tumor samples, PDCs, scPDCs, and PDX, suggesting a shared monoclonal origin. The PDCs from both subtypes exhibited hallmarks of tumorigenesis, retention of subtype-defining genomic features, production of 2-hydroxyglutarate, and subtype-specific telomere maintenance mechanisms that confer tumor cell immortality. The oligodendroglioma PDCs formed infiltrative intracranial tumors with characteristic histology.

conclusionsThese PDCs, scPDCs, and PDX are unique and versatile community resources that model the heterogeneous clonal origins and functions of recurrent

Indexed as

hypermutationIDH1-mutant gliomaintracranial xenograftintratumoral heterogeneity and evolutionpatient-derived cells

Identifiers

PMID32904945
PMCPMC7462278
OpenAlexW3042269424

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.