Evidence map›Paper›PMID 32903788›Full record

ArticleJCO precision oncology2020

Pan-Cancer Analysis of

Ethan S Sokol, Dean Pavlick, Hossein Khiabanian, Garrett M Frampton, Jeffrey S Ross, Jeffrey P Gregg, Primo N Lara, Steffi Oesterreich, Neeraj Agarwal, Andrea Necchi and 5 more

Open access · hybridAbstract read
In one paragraph

Article in JCO precision oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed, 4 pooled it
22.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 4 syntheses or guidelines pooled it, 172 citations in OpenAlex.

  1. Pooled it
  2. Homologous Recombination Deficiency in Pancreatic Cancer: A Systematic Review and Prevalence Meta-Analysis.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2021
    Pooled it
  3. SEOM clinical guidelines for the treatment of advanced prostate cancer (2020).Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2021
    Guideline
  4. Pooled it
  5. Trial
  6. Trial
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  8. Article
  9. Review
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  11. Article
  12. Review
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  20. Translational breast cancer research : a journal focusing on translational research in breast cancer · 2026
    Review

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Ethan S SokolFoundation Medicine, Cambridge, MA.
Dean PavlickFoundation Medicine, Cambridge, MA.
Hossein KhiabanianRutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ.
Garrett M FramptonFoundation Medicine, Cambridge, MA.
Jeffrey S RossFoundation Medicine, Cambridge, MA.
Jeffrey P GreggUniversity of California Davis Medical Center, Sacramento, CA.
Primo N LaraUniversity of California Davis Medical Center, Sacramento, CA.
Steffi OesterreichUniversity of Pittsburgh, Womens Cancer Research Center/Department of Pharmacology and Chemical Biology, UPMC Hillman Cancer Center, Pittsburgh, PA.
Neeraj AgarwalUniversity of Utah, Salt Lake City, UT.
Andrea NecchiFondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy.
Vincent A MillerFoundation Medicine, Cambridge, MA.
Brian AlexanderFoundation Medicine, Cambridge, MA.
Siraj M AliFoundation Medicine, Cambridge, MA.
Shridar GanesanRutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ.
Jon H ChungFoundation Medicine, Cambridge, MA.
Foundation Medicine (United States)Rutgers, The State University of New Jersey · USUniversity of California Davis Medical Center · USCancer Research Center · USFondazione IRCCS Istituto Nazionale dei Tumori · ITUniversity of Utah · US

Funding

TRANSCRIPTIONAL PROFILINGP30CA072720 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Chang S Chan · 1997 to 2026
$94.5M
Variation in Receptor Tyrosine Kinases and Breast Cancer RiskP50CA089393 · NCI · DANA-FARBER CANCER INSTITUTE · PI HARRIS, LYNDSAY NORINE · 2000 to 2009
$28.8M
NCI NIH HHS P30 CA072720NCI NIH HHS P50 CA089393
6 · The paper itself

Abstract

purposeBRCA1 or BRCA2 loss of function results in homologous recombination deficiency (HRD), which is targetable by poly (ADP-ribose) polymerase (PARP) inhibitors and other DNA-damaging agents. In cancers associated with germline

methodsA total of 234,154 tumor samples were sequenced by hybrid capture-based comprehensive genomic profiling. Somatic, germline, and zygosity status was determined computationally.

results

conclusionBiallelic

Identifiers

PMID32903788
PMCPMC7446440
OpenAlexW3021534941

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.