Evidence map›Paper›PMID 32902705›Full record

ArticleCurrent microbiology2020

Diversity of Culturable Actinobacteria Producing Protease Inhibitors Isolated from the Intertidal Zones of Maharashtra, India.

Neha A Shintre, Vaijayanti A Tamhane, Ulfat I Baig, Anagha S Pund, Rajashree B Patwardhan, Neelima M Deshpande

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Article in Current microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Neha A ShintreDepartment of Microbiology, M.E.S. Abasaheb Garware College, Karve Road, Pune, Maharashtra, 411004, India.ORCID http://orcid.org/0000-0002-6201-9407
Vaijayanti A TamhaneInstitute of Bioinformatics and Biotechnology, Savitribai Phule Pune University, Pune, Maharashtra, 411007, India.
Ulfat I BaigIndian Institute of Science Education and Research, Pune (IISER-P), Dr. Homi Bhabha Road, Pashan, Pune, Maharashtra, 411008, India.
Anagha S PundIndian Institute of Science Education and Research, Pune (IISER-P), Dr. Homi Bhabha Road, Pashan, Pune, Maharashtra, 411008, India.
Rajashree B PatwardhanDepartment of Microbiology, Haribhai V. Desai College of Commerce, Arts and Science, Pune, Maharashtra, 411002, India.
Neelima M DeshpandeDepartment of Microbiology, M.E.S. Abasaheb Garware College, Karve Road, Pune, Maharashtra, 411004, India. neelimapune@gmail.com.ORCID http://orcid.org/0000-0001-9014-5323
Abasaheb Garware College · INIndian Institute of Science Education and Research Pune · INInstitute of Bioinformatics · IN

Funding

Rajiv Gandhi Science and Technology Commission, Government of Maharashtra Maharashtra Gene Bank Program
6 · The paper itself

Abstract

Phylogenetic diversity of culturable actinobacteria isolated from the intertidal regions of west coast of Maharashtra, India was studied using 16S rRNA gene sequencing. Total of 140 actinobacterial isolates were obtained, which belonged to 14 genera, 10 families and 65 putative species with Streptomyces being the most dominant (63%) genus followed by Nocardiopsis and Micromonospora. Isolates were screened for production of extracellular protease inhibitors (PI) against three pure proteases viz. chymotrypsin, trypsin, subtilisin and a crude extracellular protease from Pseudomonas aeruginosa. Eighty percent of the isolates showed PI activity against at least one of the four proteases, majority of these belonged to genus Streptomyces. Actinobacterial diversity from two sites Ade (17° 52' N, 73° 04' E) and Harnai (17° 48' N, 73° 05' E) with varying anthropological pressure showed that more putative species diversity was obtained from site with lower human intervention i.e. Ade (Shannon's H 3.45) than from Harnai (Shannon's H 2.83), a site with more human intervention. However, in Ade, percentage of isolates not showing PI activity against any of the proteases was close to 21% and that in Harnai was close to 9%. In other words, percentage of PI producers was lower at a site with lesser human intervention.

Indexed as

ActinobacteriaDNA, BacterialHumansIndiaPhylogenyProtease InhibitorsRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialProtease InhibitorsRNA, Ribosomal, 16S

Identifiers

PMID32902705
OpenAlexW3085103785

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.