Evidence map›Paper›PMID 32901059›Full record

ArticleScientific reports2020

Silence as a way of niche adaptation: mecC-MRSA with variations in the accessory gene regulator (agr) functionality express kaleidoscopic phenotypes.

Charlotte Huber, Ivonne Stamm, Wilma Ziebuhr, Gabriella Marincola, Markus Bischoff, Birgit Strommenger, Greta Jaschkowitz, Tessa Marciniak, Christiane Cuny, Wolfgang Witte and 8 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Analysis of the Presence of the Virulence and Regulation Genes fromInternational journal of environmental research and public health · 2023
    Article
  8. Article
  9. Article
  10. Nocturnal Birds of Prey as Carriers ofAntibiotics (Basel, Switzerland) · 2022
    Article
  11. How to survive pig farming: Mechanism of SCCFrontiers in microbiology · 2022
    Article
  12. Feline Otitis Externa Caused by Methicillin-ResistantAntibiotics (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Charlotte HuberAdvanced Light and Electron Microscopy (ZBS4), Robert Koch Institute, Berlin, Germany.
Ivonne StammIDEXX GmbH, Ludwigsburg, Germany.
Wilma ZiebuhrInstitute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany.
Gabriella MarincolaInstitute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany.
Markus BischoffInstitute of Medical Microbiology and Hygiene, Saarland University, Homburg, Germany.
Birgit StrommengerNational Reference Centre for Staphylococci and Enterococci, Robert Koch Institute, Wernigerode, Germany.
Greta JaschkowitzInstitute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany.
Tessa MarciniakInstitute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany.
Christiane CunyNational Reference Centre for Staphylococci and Enterococci, Robert Koch Institute, Wernigerode, Germany.
Wolfgang WitteNational Reference Centre for Staphylococci and Enterococci, Robert Koch Institute, Wernigerode, Germany.
Joerg DoellingerProteomics and Spectroscopy (ZBS6), Robert Koch Institute, Berlin, Germany.
Christoph SchaudinnAdvanced Light and Electron Microscopy (ZBS4), Robert Koch Institute, Berlin, Germany.
Andrea ThürmerGenome Sequencing (MF2), Robert Koch Institute, Berlin, Germany.
Lennard EppingMicrobial Genomics (NG1), Robert Koch Institute, Berlin, Germany.
Torsten SemmlerMicrobial Genomics (NG1), Robert Koch Institute, Berlin, Germany.
Antina Lübke-BeckerInstitute of Microbiology and Epizootics, Freie Universität Berlin, Berlin, Germany.
Lothar H WielerMethodology and Research Infrastructure, Robert Koch Institute, Berlin, Germany.
Birgit WaltherAdvanced Light and Electron Microscopy (ZBS4), Robert Koch Institute, Berlin, Germany. waltherb@rki.de.
Robert Koch Institute · DEUniversity of Würzburg · DEFreie Universität Berlin · DEIDEXX Laboratories (Germany) · DESaarland University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Functionality of the accessory gene regulator (agr) quorum sensing system is an important factor promoting either acute or chronic infections by the notorious opportunistic human and veterinary pathogen Staphylococcus aureus. Spontaneous alterations of the agr system are known to frequently occur in human healthcare-associated S. aureus lineages. However, data on agr integrity and function are sparse regarding other major clonal lineages. Here we report on the agr system functionality and activity level in mecC-carrying methicillin resistant S. aureus (MRSA) of various animal origins (n = 33) obtained in Europe as well as in closely related human isolates (n = 12). Whole genome analysis assigned all isolates to four clonal complexes (CC) with distinct agr types (CC599 agr I, CC49 agr II, CC130 agr III and CC1943 agr IV). Agr functionality was assessed by a combination of phenotypic assays and proteome analysis. In each CC, isolates with varying agr activity levels were detected, including the presence of completely non-functional variants. Genomic comparison of the agr I-IV encoding regions associated these phenotypic differences with variations in the agrA and agrC genes. The genomic changes were detected independently in divergent lineages, suggesting that agr variation might foster viability and adaptation of emerging MRSA lineages to distinct ecological niches.

Indexed as

Genetic VariationBacterial ProteinsHemolysin ProteinsHumansMethicillin-Resistant Staphylococcus aureusPhenotypeProteomeQuorum SensingStaphylococcal InfectionsTrans-ActivatorsVirulence FactorsAgr protein, Staphylococcus aureusBacterial ProteinsHemolysin ProteinsProteomeTrans-ActivatorsVirulence Factors

Identifiers

PMID32901059
PMCPMC7479134
OpenAlexW3084402336

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.