Evidence map›Paper›PMID 32901040›Full record

ArticleNature communications2020

Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate.

Michael Abrouk, Hanin Ibrahim Ahmed, Philippe Cubry, Denisa Šimoníková, Stéphane Cauet, Yveline Pailles, Jan Bettgenhaeuser, Liubov Gapa, Nora Scarcelli, Marie Couderc and 18 more

Abstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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  7. Phylogenetic networks empower biodiversity research.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  8. Article
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  11. Review
  12. Genomic resources, opportunities, and prospects for accelerated improvement of millets.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Michael Abrouk *Center for Desert Agriculture, Biological and Environmental Science & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0001-9082-1432
Hanin Ibrahim Ahmed *Center for Desert Agriculture, Biological and Environmental Science & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Philippe Cubry *DIADE, Univ Montpellier, IRD, Montpellier, France.ORCID http://orcid.org/0000-0003-1561-8949
Denisa ŠimoníkováInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hana for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Stéphane CauetCNRGV Plant Genomics Center, INRAE, Toulouse, France.ORCID http://orcid.org/0000-0003-4985-8940
Yveline PaillesCenter for Desert Agriculture, Biological and Environmental Science & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Jan BettgenhaeuserCenter for Desert Agriculture, Biological and Environmental Science & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0002-6901-1774
Liubov GapaCenter for Desert Agriculture, Biological and Environmental Science & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0002-2744-9858
Nora ScarcelliDIADE, Univ Montpellier, IRD, Montpellier, France.
Marie CoudercDIADE, Univ Montpellier, IRD, Montpellier, France.
Leila ZekraouiDIADE, Univ Montpellier, IRD, Montpellier, France.
Nagarajan KathiresanSupercomputing Core Lab, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Jana ČížkováInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hana for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Eva HřibováInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hana for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Jaroslav DoleželInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hana for Biotechnological and Agricultural Research, Olomouc, Czech Republic.ORCID http://orcid.org/0000-0002-6263-0492
Sandrine ArribatCNRGV Plant Genomics Center, INRAE, Toulouse, France.
Hélène BergèsCNRGV Plant Genomics Center, INRAE, Toulouse, France.
Jan J WieringaNaturalis Biodiversity Center, Leiden, the Netherlands.ORCID http://orcid.org/0000-0003-0566-372X
Mathieu GueyeLaboratoire de Botanique, Département de Botanique et Géologie, IFAN Ch. A. Diop/UCAD, Dakar, Senegal.
Ndjido A KaneSenegalese Agricultural Research Institute, Dakar, Senegal.ORCID http://orcid.org/0000-0002-1879-019X
Christian LeclercCIRAD, UMR AGAP, Montpellier, France.
Sandrine CausseCIRAD, UMR AGAP, Montpellier, France.
Sylvie VancoppenolleCIRAD, UMR AGAP, Montpellier, France.
Claire BillotCIRAD, UMR AGAP, Montpellier, France.
Thomas WickerDepartment of Plant and Microbial Biology, University of Zurich, Zürich, Switzerland.
Yves VigourouxDIADE, Univ Montpellier, IRD, Montpellier, France.ORCID http://orcid.org/0000-0002-8361-6040
Adeline BarnaudDIADE, Univ Montpellier, IRD, Montpellier, France. adeline.barnaud@ird.fr.ORCID http://orcid.org/0000-0001-9896-1210
Simon G KrattingerCenter for Desert Agriculture, Biological and Environmental Science & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia. simon.krattinger@kaust.edu.sa.ORCID http://orcid.org/0000-0001-6912-7411

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sustainable food production in the context of climate change necessitates diversification of agriculture and a more efficient utilization of plant genetic resources. Fonio millet (Digitaria exilis) is an orphan African cereal crop with a great potential for dryland agriculture. Here, we establish high-quality genomic resources to facilitate fonio improvement through molecular breeding. These include a chromosome-scale reference assembly and deep re-sequencing of 183 cultivated and wild Digitaria accessions, enabling insights into genetic diversity, population structure, and domestication. Fonio diversity is shaped by climatic, geographic, and ethnolinguistic factors. Two genes associated with seed size and shattering showed signatures of selection. Most known domestication genes from other cereal models however have not experienced strong selection in fonio, providing direct targets to rapidly improve this crop for agriculture in hot and dry environments.

Indexed as

AfricaAgricultureClimate ChangeDigitariaDomesticationEdible GrainEvolution, MolecularGenetic VariationGenome, PlantMolecular Sequence AnnotationSelection, GeneticSpecies Specificity

Identifiers

PMID32901040
PMCPMC7479619

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.