Evidence map›Paper›PMID 32900995›Full record

ArticleNature communications2020

Modulating mechanical stability of heterodimerization between engineered orthogonal helical domains.

Miao Yu, Zhihai Zhao, Zibo Chen, Shimin Le, Jie Yan

Abstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. APL bioengineering · 2024
    Article
  6. Article
  7. One-step asparaginyl endopeptidase (RSC chemical biology · 2022
    Article
  8. Mechanical Stabilization of a Bacterial Adhesion Complex.Journal of the American Chemical Society · 2022
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Miao YuMechanobiology Institute, National University of Singapore, Singapore, 117411, Singapore.
Zhihai ZhaoDepartment of Physics, National University of Singapore, Singapore, 117542, Singapore.
Zibo ChenDepartment of Biochemistry, University of Washington, Seattle, WA, 98195, USA.
Shimin LeDepartment of Physics, National University of Singapore, Singapore, 117542, Singapore. phyles@nus.edu.sg.ORCID http://orcid.org/0000-0003-2359-1897
Jie YanMechanobiology Institute, National University of Singapore, Singapore, 117411, Singapore. phyyj@nus.edu.sg.ORCID http://orcid.org/0000-0002-8555-7291

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mechanically stable specific heterodimerization between small protein domains have a wide scope of applications, from using as a molecular anchorage in single-molecule force spectroscopy studies of protein mechanics, to serving as force-bearing protein linker for modulation of mechanotransduction of cells, and potentially acting as a molecular crosslinker for functional materials. Here, we explore the possibility to develop heterodimerization system with a range of mechanical stability from a set of recently engineered helix-heterotetramers whose mechanical properties have yet to be characterized. We demonstrate this possibility using two randomly chosen helix-heterotetramers, showing that their mechanical properties can be modulated by changing the stretching geometry and the number of interacting helices. These helix-heterotetramers and their derivatives are sufficiently stable over physiological temperature range. Using it as mechanically stable anchorage, we demonstrate the applications in single-molecule manipulation studies of the temperature dependent unfolding and refolding of a titin immunoglobulin domain and α-actinin spectrin repeats.

Indexed as

Protein EngineeringProtein MultimerizationProtein StabilityActininBiomechanical PhenomenaConnectinModels, MolecularMolecular Dynamics SimulationProtein Conformation, alpha-HelicalProtein DomainsProtein FoldingProtein Structure, QuaternaryProtein UnfoldingSingle Molecule ImagingTemperatureActininConnectin

Identifiers

PMID32900995
PMCPMC7479118

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.