Evidence map›Paper›PMID 32900872›Full record

ArticlemSystems2020

Pivotal Roles for pH, Lactate, and Lactate-Utilizing Bacteria in the Stability of a Human Colonic Microbial Ecosystem.

Shui Ping Wang, Luis A Rubio, Sylvia H Duncan, Gillian E Donachie, Grietje Holtrop, Galiana Lo, Freda M Farquharson, Josef Wagner, Julian Parkhill, Petra Louis and 2 more

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 165 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Microorganisms · 2026
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  6. Acidification-dependent suppression ofInfection and immunity · 2026
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  9. Review
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  11. Interspecies interaction controlsProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  12. Review
  13. Acidification-dependent suppression ofbioRxiv : the preprint server for biology · 2026
    Article
  14. Article
  15. Article
  16. LRRK2NPJ Parkinson's disease · 2026
    Article
  17. Article
  18. Review
  19. Article
  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Shui Ping Wang *College of Animal Science, Southwest University, Chongqing, People's Republic of China.
Luis A Rubio *Physiology and Biochemistry of Animal Nutrition (EEZ, CSIC), Granada, Spain.
Sylvia H DuncanGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK.
Gillian E DonachieGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK.
Grietje HoltropBiomathematics and Statistics Scotland (BioSS), Aberdeen, Scotland, UK.
Galiana LoGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK.
Freda M FarquharsonGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK.
Josef WagnerPathogen Genomics Group, Wellcome Sanger Institute, Hinxton, Cambridgeshire, UK.
Julian ParkhillDepartment of Veterinary Medicine, University of Cambridge, Cambridge, UK.ORCID https://orcid.org/0000-0002-7069-5958
Petra LouisGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK.ORCID https://orcid.org/0000-0003-2115-2399
Alan W WalkerGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK alan.walker@abdn.ac.uk.ORCID https://orcid.org/0000-0001-5099-8495
Harry J FlintGut Health Group, Rowett Institute, University of Aberdeen, Foresterhill, Aberdeen, Scotland, UK.
University of Aberdeen · GBBiomathematics and Statistics Scotland · GBConsejo Superior de Investigaciones Científicas · ESSouthwest University · CNUniversity of Cambridge · GBWellcome Sanger Institute · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Lactate can be produced by many gut bacteria, but in adults its accumulation in the colon is often an indicator of microbiota perturbation. Using continuous culture anaerobic fermentor systems, we found that lactate concentrations remained low in communities of human colonic bacteria maintained at pH 6.5, even when dl-lactate was infused at 10 or 20 mM. In contrast, lower pH (5.5) led to periodic lactate accumulation following lactate infusion in three fecal microbial communities examined. Lactate accumulation was concomitant with greatly reduced butyrate and propionate production and major shifts in microbiota composition, with

Indexed as

lactatelactate-utilizing bacteriamathematical modelingpHshort-chain fatty acids

Identifiers

PMID32900872
PMCPMC7483512
OpenAlexW3080780062

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.