Evidence map›Paper›PMID 32900812›Full record

ArticlemBio2020

Network Rewiring: Physiological Consequences of Reciprocally Exchanging the Physical Locations and Growth-Phase-Dependent Expression Patterns of the

Marina M Bogue, Aalap Mogre, Michael C Beckett, Nicholas R Thomson, Charles J Dorman

Open access · goldAbstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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  6. The regulation of DNA supercoiling across evolution.Protein science : a publication of the Protein Society · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Marina M Bogue *Department of Microbiology, Moyne Institute of Preventive Medicine, Trinity College Dublin, Dublin, Ireland.
Aalap Mogre *Department of Microbiology, Moyne Institute of Preventive Medicine, Trinity College Dublin, Dublin, Ireland.
Michael C BeckettDepartment of Microbiology, Moyne Institute of Preventive Medicine, Trinity College Dublin, Dublin, Ireland.
Nicholas R ThomsonWellcome Genome Campus, Hinxton, Saffron Walden, United Kingdom.
Charles J DormanDepartment of Microbiology, Moyne Institute of Preventive Medicine, Trinity College Dublin, Dublin, Ireland cjdorman@tcd.ie.
Trinity College Dublin · IEWellcome Connecting Science · GB

Funding

Wellcome Trust 206194
6 · The paper itself

Abstract

The Fis nucleoid-associated protein controls the expression of a large and diverse regulon of genes in Gram-negative bacteria. Fis production is normally maximal in bacteria during the early exponential phase of batch culture growth, becoming almost undetectable by the onset of stationary phase. We tested the effect on the Fis regulatory network in

Indexed as

Gene Expression Regulation, BacterialGene Regulatory NetworksBacterial ProteinsGenes, BacterialGenome, BacterialPromoter Regions, GeneticRegulonSalmonella typhimuriumSequence Analysis, RNAVirulenceBacterial ProteinsChIP-seqDpsFisnucleoid-associated proteinRNA-seqSalmonella enterica serovar Typhimuriumtranscriptomevirulence

Identifiers

PMID32900812
PMCPMC7482072
OpenAlexW3084320160

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.